Bradyrhizobium symbiodeficiens: CIT39_07040
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Entry
CIT39_07040 CDS
T06284
Name
(GenBank) methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsym03009
]
CIT39_07040
Enzymes [BR:
bsym01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CIT39_07040
Ribosome biogenesis [BR:
bsym03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CIT39_07040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_25
Methyltransf_31
TRM5-TYW2_MTfase
Cons_hypoth95
TehB
Motif
Other DBs
NCBI-ProteinID:
AWM06222
LinkDB
All DBs
Position
complement(2185605..2186852)
Genome browser
AA seq
415 aa
AA seq
DB search
MVERLTIDHVGHRGDGVCLDAGEAIYVPYTLGGETVEVDHVVGNHPDRRKLLAVDLASLE
RIEPFCPHFGVCGGCAIQHWAAEPYRAWKRSIVVETLAQAGIDCEVAPLVDAHGAGRRRI
TLHGRFGTHDVLKVGFAAASSHDVIPIDRCPILDPALNGALDAAWALAEPLTSRMPVTKP
LDIQVTATANGLDVDVRGSGPLPTPLVTALSRVAEQHHLARLTRHGELVLQRLAPTIKMG
RAEVTLPPGSFLQATVAGEETLAALVAERIGKAKEVLDLFCGVGPFALRLAEKARVTAFD
NDAGAIAALAKAARTPGLKPIEAEPRDLFRRPLVPPELRDFEAVVFDPPRQGAQAQALKL
AASKVPVVVAVSCNVATFARDARLLIDGGYKIDSVVPVDQFRHTPHVELVAKFTR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtggttgagcgcctgaccatcgaccacgtcggccatcgcggcgacggcgtctgccttgac
gccggcgaagcgatctacgtgccctatacgcttggcggcgagaccgtcgaggtcgatcac
gtcgtgggcaatcatcccgaccggcgcaagctgctcgcggtcgacctcgcaagcctagag
cggatcgaaccgttctgtccgcatttcggcgtctgcggcggctgcgccatccagcattgg
gcggccgagccatatcgcgcctggaagcgcagcatcgtggtcgagacactcgcacaggcc
ggcatcgattgcgaagtcgcaccgctggtcgatgcccacggcgccgggcgcaggcgcatc
acgctgcacggccgcttcggcacgcatgacgtcctcaaggtcggtttcgcggcggcaagc
tcgcacgacgtcattccgatcgatcgttgcccgatcctcgatccggcgctgaatggcgcg
ctcgatgccgcctgggcactggcggagccgctgacgtccaggatgccggtgaccaagccg
ctggacatccaggtcaccgccaccgccaacggcctcgatgtcgacgtccgcggctccggc
ccgctgccgacgccgctggtcaccgcgctctcgcgcgtcgccgagcagcaccacctggcg
cggctgacgcgccatggcgaattggtgctgcaacgcctggcgccgacaataaagatgggc
cgcgctgaggtgacgctgccgccgggctcgttcctgcaggcaaccgtcgcgggcgaggag
acgctggcagcgctcgtcgcggaacgcatcggcaaggccaaggaggttctcgatctcttc
tgcggcgtcgggccgttcgctctgcgcctcgcggagaaggcgcgcgtcacggccttcgac
aacgacgccggcgccatcgcagcgctggcgaaagccgcacgcacgccgggcctgaagccg
atcgaggccgagccgcgcgatctgttccgccgcccgctggtgccgccggagctgcgcgat
ttcgaggccgtggtgttcgacccgccgcgccagggcgcgcaggcgcaggcgttgaagctc
gccgcgagcaaggtaccggtggtggtcgcggtgtcctgcaacgtcgccacctttgcccgc
gacgcgcggctgctgatcgatggcggctacaagatcgacagcgtcgttccggtcgaccag
ttccggcacacgccgcatgtggagctcgtcgccaagttcacgcggtag
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