Bradyrhizobium symbiodeficiens: CIT39_09170
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Entry
CIT39_09170 CDS
T06284
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CIT39_09170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsym03400
]
CIT39_09170
DNA repair and recombination proteins [BR:
bsym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CIT39_09170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AWM06603
UniProt:
A0A2U8Q8W8
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All DBs
Position
complement(2014726..2015700)
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AA seq
324 aa
AA seq
DB search
MAPRANWKGFLRLSLVTCPVALYPATSDTEKVSFNQINRKTGHRIKYLKVDAETGDEVTS
EDIVKGYKVDTDTYIEVTKDELDDIALDSTHTIDIDEFVPKADIDNRYLIRPYYLVPDGK
VGHDAYAVIRETIRSMDKVAIGRVVLTNREHIIALEPLESGLMGTLLRYPYEVRSETEYF
DDIQDVKLTRDMLDLAKHIVEKKSGAFEPELFEDHYETALIDLINKKRSGAPITAKAAPK
GGGNVINLMDALKKSIANEKDAPAAKVAKETVKARKPKKRVEGQREMLLPISGKGGKEAA
AKAATTPKKADKPVRAPARAKKAG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggccccccgcgccaattggaagggttttctgcgtttgtcgctcgtgacctgtccggtc
gcgctctatccggccacttcggataccgagaaggtctccttcaaccagatcaaccgcaag
accggccaccggatcaagtacctcaaggtcgacgccgagaccggcgacgaggtgacctcc
gaggacatcgtcaagggctacaaggtcgacaccgacacctatatcgaggtcaccaaggac
gagctcgacgacatcgcgctcgactcgacccacacgatcgatatcgacgagttcgtgccg
aaggccgacatcgacaaccgctatctgatccgcccctattatctcgtgcccgacggcaag
gtcggccacgacgcctacgcggtgatccgcgagaccatccgcagcatggacaaggtcgcg
atcggccgcgtggtgctgaccaaccgcgagcacatcatcgcgctcgagccgctggagagc
gggctgatgggcacgctgctgcgctatccctatgaagtccgcagcgagaccgagtatttc
gacgacatccaggacgtgaagttgaccagggacatgctcgacctcgccaagcacatcgtc
gagaagaagtccggcgcattcgagcccgagctgttcgaggaccattacgagaccgcgctg
atcgatctcatcaacaagaagcgcagcggtgcgccgatcactgccaaggccgcgccgaag
ggcggcggcaacgtcatcaacctgatggacgcgctgaagaagagcatcgcgaacgagaag
gacgcccccgcggcgaaggtcgccaaggagaccgtcaaggccaggaagccgaaaaagcgc
gtcgagggccagcgcgagatgctgttgccgatatccggcaagggcggcaaggaggccgcg
gccaaggcagcgaccacgccgaagaaggccgacaagccggtgcgcgcgccggcgcgggcg
aagaaggccggttag
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