KEGG   Bradyrhizobium symbiodeficiens: CIT39_09170
Entry
CIT39_09170       CDS       T06284                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
bsym  Bradyrhizobium symbiodeficiens
Pathway
bsym03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bsym00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CIT39_09170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bsym03400]
    CIT39_09170
DNA repair and recombination proteins [BR:bsym03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CIT39_09170
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AWM06603
UniProt: A0A2U8Q8W8
LinkDB
Position
complement(2014726..2015700)
AA seq 324 aa
MAPRANWKGFLRLSLVTCPVALYPATSDTEKVSFNQINRKTGHRIKYLKVDAETGDEVTS
EDIVKGYKVDTDTYIEVTKDELDDIALDSTHTIDIDEFVPKADIDNRYLIRPYYLVPDGK
VGHDAYAVIRETIRSMDKVAIGRVVLTNREHIIALEPLESGLMGTLLRYPYEVRSETEYF
DDIQDVKLTRDMLDLAKHIVEKKSGAFEPELFEDHYETALIDLINKKRSGAPITAKAAPK
GGGNVINLMDALKKSIANEKDAPAAKVAKETVKARKPKKRVEGQREMLLPISGKGGKEAA
AKAATTPKKADKPVRAPARAKKAG
NT seq 975 nt   +upstreamnt  +downstreamnt
atggccccccgcgccaattggaagggttttctgcgtttgtcgctcgtgacctgtccggtc
gcgctctatccggccacttcggataccgagaaggtctccttcaaccagatcaaccgcaag
accggccaccggatcaagtacctcaaggtcgacgccgagaccggcgacgaggtgacctcc
gaggacatcgtcaagggctacaaggtcgacaccgacacctatatcgaggtcaccaaggac
gagctcgacgacatcgcgctcgactcgacccacacgatcgatatcgacgagttcgtgccg
aaggccgacatcgacaaccgctatctgatccgcccctattatctcgtgcccgacggcaag
gtcggccacgacgcctacgcggtgatccgcgagaccatccgcagcatggacaaggtcgcg
atcggccgcgtggtgctgaccaaccgcgagcacatcatcgcgctcgagccgctggagagc
gggctgatgggcacgctgctgcgctatccctatgaagtccgcagcgagaccgagtatttc
gacgacatccaggacgtgaagttgaccagggacatgctcgacctcgccaagcacatcgtc
gagaagaagtccggcgcattcgagcccgagctgttcgaggaccattacgagaccgcgctg
atcgatctcatcaacaagaagcgcagcggtgcgccgatcactgccaaggccgcgccgaag
ggcggcggcaacgtcatcaacctgatggacgcgctgaagaagagcatcgcgaacgagaag
gacgcccccgcggcgaaggtcgccaaggagaccgtcaaggccaggaagccgaaaaagcgc
gtcgagggccagcgcgagatgctgttgccgatatccggcaagggcggcaaggaggccgcg
gccaaggcagcgaccacgccgaagaaggccgacaagccggtgcgcgcgccggcgcgggcg
aagaaggccggttag

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