Bradyrhizobium symbiodeficiens: CIT39_11445
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Entry
CIT39_11445 CDS
T06284
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsym03016
]
CIT39_11445 (rnz)
Enzymes [BR:
bsym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CIT39_11445 (rnz)
Transfer RNA biogenesis [BR:
bsym03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CIT39_11445 (rnz)
Prokaryotic type
CIT39_11445 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_3
NAD_binding_10
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AWM07002
LinkDB
All DBs
Position
3154519..3155421
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AA seq
300 aa
AA seq
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MFALTFLGTSASVPSAERNHPALLVEAAGQRMLVDCGEGTQRQLLRSGAGFRRLDRVLLT
HAHLDHVLGIPGLFSTLGLRRSADAMTIHGGLGTLDIVIRMLAGLWGAGRAPIPVEFAAL
SEGQVIDAGDFTIACFPVRHRDTDSFGFVFQSPARRHLLSERLSALGVPDGPIRGELAAG
RAIVIGDRTIDPEDVLGPPSGGKRLVVIGDTETTEGLAQHVADADLLVIEATFLDRDAST
ARDYGHLTAAEAASFAAASNVKQLVLTHMSGRYEDEEVLAEAARIFPNSRIAADFDHIAI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccctgacatttctcgggacctccgcaagtgttccgtccgccgaacgcaaccat
ccggccctcctcgtggaggccgcgggccagcgcatgctggtcgattgcggcgagggcacg
cagcgccagttgctacgcagtggcgccggctttcggcggctcgaccgcgtgctgctgacg
cacgcgcatctcgatcatgtgctgggcatccccggtctgttttcaacattgggattgcgg
cggagtgccgacgcgatgaccattcatggcgggcttggcacactcgacatcgtcatccgg
atgctcgcgggcctgtggggtgcgggcagggcgccgatccctgtcgagttcgcagccttg
agcgaaggacaggtcatcgatgccggtgacttcaccatcgcctgctttccggttcgccac
cgcgacaccgacagttttggtttcgtcttccaaagtcccgcgcgccgtcatctcttgtcg
gaacgcctttcggccctgggcgtgccggatggccctatccgtggagagttggctgcggga
cgagccatcgtgatcggtgatcgcacgatcgatccggaagacgtcctgggtccgccgagc
ggcggcaagaggctcgtcgtgatcggcgacaccgaaaccaccgaggggctggcgcaacac
gtcgctgatgccgatctgctcgtgatcgaggcaacgttcctcgatcgtgacgcgtcgacc
gcgcgggactacgggcatctcaccgcggcagaagcggcgtcgtttgcggcagcgagcaat
gtgaagcagctcgtgctgacccatatgtcgggacgctatgaggacgaagaggtcctcgcc
gaggcggcaaggatctttccgaacagccggatcgccgccgacttcgatcacatcgcgatc
tag
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