Bradyrhizobium symbiodeficiens: CIT39_11560
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Entry
CIT39_11560 CDS
T06284
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bsym03000
]
CIT39_11560
Transcription factors [BR:
bsym03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CIT39_11560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AWM07021
UniProt:
A0A2U8QAE6
LinkDB
All DBs
Position
complement(3179333..3180433)
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AA seq
366 aa
AA seq
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MGRKRTKSGKIRLAEVAELAGVSPITASRFFRNPDALSIGKRTRVESAAKELGYVPNLAA
RALASQRTEVIGVLIPSLTNNVFSDVLRGIYDASEGSRYSIQLSNTRYSILQEEKLLRLF
LAQKPAGLIVTGIDQTPESRAMLEAADCPIVQIMEIGPDPVDMMIGFSHHDAARAAVSHL
FEQGRRKIGFVGARMDPRVQRRLDGYVSAMKDAGSFEQRLVVTTATPTSVTLGGALFTDL
LAGEPDLDAVFCANDDLALGVLFECRRREIAVPEQIAIVGFNDLEFMASAVPTLTSVRTN
RYEMGKTAATMLIEAIGGQRPEQPVLDLGFRVIERQSSLPRHSDSRPAVSGAGAANKMVA
LPSSHD
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaaacgcaccaagtcaggcaagatccggctggcggaagtcgccgagcttgct
ggcgtcagcccgattacggcgtcccgcttcttccgtaatccggacgccctgtcgatcggc
aagcggacgcgggtcgagagcgccgccaaggagctcggctatgtgccgaaccttgcggcc
cgcgcgctggcctcgcaacgtaccgaggtcatcggtgtcctgattccctctctcaccaac
aacgtcttctcggacgtgctgcgcggcatctacgacgcctccgaaggcagccgctactcg
atccagttgtcgaacacgcgctacagcattctgcaggaagaaaagctgctgcggctgttt
ctcgcgcagaagccggccgggctgatcgtcaccggtatcgaccagaccccggaatcgcgc
gccatgctcgaggccgccgattgcccgatcgtgcagatcatggagatcggccccgatccg
gtcgacatgatgatcggcttttcgcaccatgatgcagcccgcgcagcggtttcgcacctg
ttcgaacagggccgccgcaagatcggcttcgtcggcgcgcggatggatcccagggtgcag
cggcggctggacggatatgtctcggccatgaaggacgccgggtcgttcgaacagcgcctc
gtcgtcaccacggcgacgccgacctcggtgacgctgggcggcgccctgttcaccgatctc
ctggcgggcgagcccgatctcgatgcagtgttctgcgccaatgacgacctcgcgctcggc
gtgctgttcgaatgccgccgccgcgagatcgccgtgcccgagcagatcgcgatcgtcggc
ttcaacgacctggaattcatggcctccgccgtccccaccctcaccagcgtgcgcaccaac
cgttacgagatgggcaaaacagccgccaccatgctgatcgaggcgatcggtggacagcgc
ccggagcagccggtgctcgatctcggcttcagggtgatcgaacggcaaagttcattgccg
cgccattcggacagcaggccagccgtttcaggcgcgggcgcggcgaacaaaatggtagcg
ttaccaagtagccatgactag
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