Bradyrhizobium symbiodeficiens: CIT39_12110
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Entry
CIT39_12110 CDS
T06284
Name
(GenBank) TCR/Tet family MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsym02000
]
CIT39_12110
01504 Antimicrobial resistance genes [BR:
bsym01504
]
CIT39_12110
Transporters [BR:
bsym02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
CIT39_12110
Antimicrobial resistance genes [BR:
bsym01504
]
Gene variants
Tetracycline resistance genes
Transporters
CIT39_12110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
Pox_I5
Motif
Other DBs
NCBI-ProteinID:
AWM07120
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All DBs
Position
3287077..3288333
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AA seq
418 aa
AA seq
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MSDGAGEAMAQGAAPVRRGAVAFIFVTILLDMLALGVIMPILPKLIESFVDNDTAHAARI
FGLFGTAWALMQFVFSPLLGALSDRFGRRPVVLLSNFGLAADYVLMALAPSLLWLFVGRV
ISGITSASISTAFAYIADITPPERRAAVFGRIGAAFGAGFILGPALGGLLGDIDPRLPFW
ASAALSFANALYGLFVLPESLAPDKRQPFRWRSASPVGALRLLRSNAMLAALSVVNFIAQ
VAHVVLPSTFVLYATYRYGWDSKTVGLTLAMVGICAMVVQGLAIGAIVRVLGERNALLLG
LCCGALGFLVLGSAPTGPLSWIGIPILALWGISGAASQALMTRLVAPDQQGQLQGATASV
QSVSQLVGPFLFTLTFSYFIGASAPLHLPGAPFLLAAMLMVVCVAIAVRTLGAAKTVS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacggcgccggcgaggcgatggcgcagggcgctgcgccggtccggcgcggtgcc
gtcgccttcatcttcgttaccatcctcctggacatgctcgcgctcggcgtgatcatgccg
atcctgccgaagctgatcgagagcttcgtcgacaacgacaccgcgcacgcggcgcgcatc
ttcggcctgttcggcaccgcttgggcgctgatgcaattcgtgttctcgccgctgttgggg
gcgctgtcggatcgcttcgggcggcggccggtggtgctgctgtcgaatttcggcctcgcc
gccgattacgtgctgatggcgctggcgccatccctgctgtggttgttcgtcggccgcgtg
atctccggcatcacctcggccagcatttcgacggcgtttgcctacatcgccgatatcacg
ccgccggagcggcgtgcggcggtgttcggccggattggcgcggccttcggcgccggcttc
atcctggggccagcgcttggcggcctgctcggcgatatcgatccgcggctgccgttctgg
gcgtcggccgcgctcagcttcgccaatgcgctctacgggctgttcgtcctgccggaatcg
ctcgcgcccgacaagcgccagccgttccgctggaggagcgccagtccggtcggtgcgctc
cgcctgctgcgctccaatgcgatgcttgccgcgttgtccgtcgtcaatttcatcgcgcag
gtcgcgcatgtcgtgctgccttcgaccttcgtgctctatgcgacctatcgctacggctgg
gattccaagacggtaggattgacgctggctatggtcggcatctgcgccatggtggtgcag
gggctcgcaatcggcgccatcgtgcgggtgctcggcgagcggaatgcgctcctgctcggc
ctgtgttgtggggcgctcggctttttggtcctcggcagtgcgccgaccgggccgctgtcc
tggatcgggattcccattctggcgctgtggggcatctcgggtgcagcctcgcaagcgctg
atgacgcggctggtcgcgcccgatcagcagggccagctccagggcgcgaccgcgagcgtg
cagagcgtgtcgcagctcgtcggccccttcctgttcacgctcacattttcatatttcatc
ggcgccagcgcgccgctgcatctgcccggcgcgccgttcctgctcgcggcgatgctgatg
gtggtctgcgtggcgatcgcggtgcggacgctgggggcggcgaagacggtctcgtag
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