Bradyrhizobium symbiodeficiens: CIT39_13415
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Entry
CIT39_13415 CDS
T06284
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00450
Selenocompound metabolism
bsym01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CIT39_13415
Enzymes [BR:
bsym01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
CIT39_13415
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
CIT39_13415
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AWM07354
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Position
3554760..3556007
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AA seq
415 aa
AA seq
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MSTHPAVKNGAYDVARVRQDFPALALQVYGKNLVYLDNAASAQKPSAVLDRMTQAYTSEY
ANVHRGLHYLANAATEAYEGGRTKVAQFINAPRTEEVIFTRNATEAINLVASSWGGPNIK
EGDEIVLSIMEHHSNIVPWHFLRERQGAVIKWAPVDDEGNFLIDEFEKLLTAKTKLVAIT
QMSNALGTIVPVKEVVKIAHARGIPVLVDGSQGAVHLPVDVQDIGCDFYVFTGHKVYGPT
GIGVLWAKYDHLVAMRPFNGGGEMIREVSRDVVTYGDPPHKFEAGTPAIVEAVGLGAAID
YVNSIGKERIAAHERDLTTYAQEKLREINSLRLIGTARGKGPVISFELKGAHAHDVATVI
DRQGIAVRAGTHCVMPLLERFNVTATCRASFGMYNTREEVDHLAQALLKARDLFA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcatccggcagtcaaaaacggcgcctatgacgtcgcgcgcgtccgccaggat
ttcccggcgctcgccttgcaggtctatggcaagaatctggtgtatctcgacaacgcggcc
tcggcgcagaagccgagcgccgtgctcgatcgcatgacgcaggcctatacgagcgaatac
gccaacgtgcatcgcggcctgcattacctcgccaatgccgcgaccgaagcctatgagggc
ggtcgcaccaaggtcgcgcagttcatcaatgcgccccggaccgaggaagtgatcttcacc
cgcaacgcgacggaggccatcaacctggtcgcctcgtcctggggcgggccgaacatcaaa
gagggcgacgagatcgtcctctcgatcatggagcaccattccaacatcgtgccctggcat
ttcctcagggaacgtcaaggtgccgtgatcaaatgggcgccggtcgacgacgagggcaat
ttcctcatcgacgagttcgagaagcttctgacggccaagaccaagctggtcgcgatcact
cagatgtcgaatgcgctcggcaccatcgtgccggtcaaggaggtcgtgaagatcgcccac
gcgcggggcattcccgtgctggtcgacggcagccagggtgcggtgcatctgcccgtcgac
gtccaggacatcggctgcgacttctacgtcttcaccggccacaaggtgtacggtccgacc
ggcatcggcgtgctctgggccaagtacgaccacctcgtcgcgatgcgccccttcaatggc
ggcggcgagatgatccgcgaggtctcgcgcgatgtcgtcacctacggcgatcctccgcat
aaattcgaggcgggcacgcccgcgatcgtcgaggccgtcggccttggcgccgccatcgac
tacgtcaattcgatcggcaaggagcgcatcgccgcgcatgagcgcgatctcaccacctat
gcccaggagaagctgcgcgagatcaactcgctgcggttgatcggcacggcacgcggcaag
ggtccggtgatctcgttcgagctgaagggcgcgcatgcccatgacgtcgccaccgtgatc
gaccgccagggcatcgcagtgcgcgccggcacccattgcgtgatgccgcttttagagcgg
ttcaacgtcacggccacatgccgagcctcgttcggcatgtataatacgcgggaagaagtc
gatcatctggcacaggcgctgctgaaggcgcgggatttgttcgcatga
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