Bradyrhizobium symbiodeficiens: CIT39_13985
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Entry
CIT39_13985 CDS
T06284
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00550
Peptidoglycan biosynthesis
bsym01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CIT39_13985 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bsym01003
]
CIT39_13985 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bsym01011
]
CIT39_13985 (pbpC)
Enzymes [BR:
bsym01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CIT39_13985 (pbpC)
Glycosyltransferases [BR:
bsym01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CIT39_13985 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
bsym01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CIT39_13985 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AWM07453
UniProt:
A0A2U8QBD8
LinkDB
All DBs
Position
3009410..3011521
Genome browser
AA seq
703 aa
AA seq
DB search
MDGRDKPGRDGHRGRIALRLLSATALTFIIAICTFVGWVYSLGPLPLDEARHVSTTIVDR
NGKLLRAYAMPDGRWRLPVDAKSNVDPTYLKLLFAYEDQRFYAHNGLDPLALGRAVLQLA
TRGHIVSGGSTISMQLARLMEPRRHRSLYAKLRQMVRAVEIERSMSKDQILDLYLALAPY
GGNLEGIRAASIGYLGKEPKRLSLAEAALLVALPQSPERRRLDRHPEAARKARDRVLDRM
VEEHVVSADDARQAKAVPVPKLRKPMPILAPHASDTALSTVKDTAVIKLTLDANLQKMLE
PLARDRAIALGPNISVGIIVVDNESGDVLARVGSADYFDESRAGQVDMTRAIRSPGSTLK
PFIYGLAFEDGFVHPESLIDDRPVRFGSYAPENFDMTFQGTVPVRKALQLSLNVPAIVLL
DRVGSSRLASRLRQAGGNLVLPKDEAPGLAMGLGGVGVTLQDLAQLYTGFARLGTSKPLR
EVMADKDDREPLRLLDQVAAWQVGNVLLGTPPPENAAHNRIAFKTGTSYGYRDAWSVGFD
GRMTIGVWVGRPDGAPVPGLIGRVAAAPILFDAFARTGKTLTALPKPPRGTLVASNAKLP
LPLKRFRPVGELVRTGREQALHIQFPLNGSRIDVDRSGGQESAAMPVKVAGGVLPMTVMV
NGTALGEIDGRRQRLIDPPGPGFARLTVIDATGAADTVVIRIQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtggatggccgggacaagcccggccgcgacgggcacagagggcggatcgctcttcgcctt
ctctcggcaactgctctcaccttcatcatcgccatttgcaccttcgtcggctgggtttac
tccctcggacctctcccgctcgacgaagcccggcacgtctccaccaccatcgtcgaccgc
aacggcaagctgctgcgcgcctatgcgatgccggacggtcgctggcggttgccggtcgat
gccaaatccaacgtcgatccgacctatctgaaactgctgttcgcctatgaggaccagcgc
ttctacgcgcataacggtctcgacccgctggcgctcgggcgtgccgtcctgcagctcgcg
acacgcggccacatcgtgtcgggcggctcgaccatcagcatgcagctggcgcggctgatg
gagccgcggcggcaccgctcgctctacgccaagctgcggcagatggttcgtgcggtcgag
atcgagcgcagcatgagcaaggaccagattctcgatctctatcttgcgctggcgccctac
ggcggcaatctcgaaggcatccgcgccgcctcgatcggctatcttggcaaggagccgaag
cggctgtcgctggccgaggccgcgctgctggtcgcgctgccgcaatcgccggagaggcgc
cgcctcgaccgccatcccgaggccgcacgcaaggcgcgcgaccgcgtgctcgaccgcatg
gtcgaggagcatgtggtcagcgcggacgacgccaggcaggccaaggccgtgcccgtgccg
aagctgcgcaagccgatgccgatcctggcgcctcatgcctccgacaccgcgctgtcgacg
gtcaaggacacggcggtcatcaagctgacgctggatgcgaacctgcagaagatgctggag
ccgctggcccgcgatcgcgcgattgcgctcggtccgaacatttcggtcggcatcatcgtg
gtcgacaatgagagcggcgacgtgctggcgcgtgtcgggtcggccgattatttcgacgag
agccgggcagggcaggtcgacatgacccgcgcgatccgctcgccgggctcgacgctgaag
cccttcatctacgggctcgccttcgaggacggcttcgttcatccggagagcctgatcgac
gaccggccggtccgcttcggctcctacgcgcccgagaatttcgacatgaccttccagggt
acggtgccggtgaggaaggcgctgcaactctcgctgaacgtgcccgcaatcgtgctgctc
gatcgcgtcggctccagccggctggcctcgcggctgcggcaggccggcggcaatctggtt
ctgcccaaggacgaagcgccggggctcgccatggggctcggcggcgtcggcgtgacgctg
caggatctcgcccagctctacaccggcttcgcccggctcggcacctccaagccgttgcgc
gaggtgatggcggacaaggacgaccgggagccgcttcggttgctggatcaggtcgcggcc
tggcaggtcggcaacgtgttgctggggacgccgccaccggagaatgccgcacacaaccgc
atcgccttcaagaccggcacctcctacggctatcgtgacgcctggtcggtcgggttcgac
ggccggatgaccatcggcgtctgggtcggccgtccggacggcgcgccggttccgggcctg
atcggccgcgtcgccgccgcaccgatcctgttcgacgccttcgcccgcaccggcaagacg
ttaaccgcgttgccgaagccgccaaggggaaccctggttgccagcaatgccaagctgccg
ttgccactgaaacggttccggccggtgggagagctggtgcgaacgggccgcgagcaggcg
ctgcacatccagtttccgctgaacggctcgcggatcgatgtcgatcgctccggggggcag
gagagcgccgcgatgccggtcaaggtcgccggtggggtgctgcccatgaccgtcatggtt
aacggtacggcgctcggcgagatcgacggccgccgccaacgcctgatcgatccacccggt
cccggctttgcgcggctcaccgtgatcgatgccacgggcgccgcggacacagtcgtcatt
cgaattcaatga
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