Bradyrhizobium symbiodeficiens: CIT39_14430
Help
Entry
CIT39_14430 CDS
T06284
Name
(GenBank) PAS domain S-box protein
Organism
bsym
Bradyrhizobium symbiodeficiens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
HATPase_c
Response_reg
PAS_9
HisKA
PAS
PAS_3
HPTransfase
Motif
Other DBs
NCBI-ProteinID:
AWM07529
LinkDB
All DBs
Position
complement(3764632..3766488)
Genome browser
AA seq
618 aa
AA seq
DB search
MISAAGVIEFASDRVTDIFGYAPDELVGSSIEVLIPERFRGEHSNQIKAYFRKPTSRMMG
GGLLLSGRRKDTTEFPAEISISPIIVADRHAAIAAVRDVSSRRTLEALQQGAAEALRESE
ERLRYFIKYSPAAIAMLDNELRYIVYSDRWLVDYGLIGRDLRGLSHYEVFPEIPERWRAI
HRRALAGETLHADEDSFTRSDGRLQWLRWEVRPWFDALGNIGGVAFLTEDITDRKRIEAQ
LAQAQKMEAIGQLTGGIAHDFNNLLTVVLGNAEVLKDEIKSDDLRKLVEPIIAAAERGAS
LTQLMLAYARRQALEPSTFELNEVVTHMNALLRRTIGENVEVELRLAKPLWSVTADIRQT
ETAILNIVLNARDAMPQGGKLTIETANVDLSDDYAAHNLEVNPGQYVMMALSDTGSGIAP
EMRDRIFEPFFTTKPVGKGTGLGLSMVYGFVKQTGGHIQVYSEVGHGTCIKIYLPRAEAG
TTTAVPSSQAPEPAATGAESILVVEDDPHVRMFAVQQLRRLGYRVTEAGDGPSALLEVSR
SGAPDLLFTDVVMPGGMTGRELAERIGQSVPGIRVLFTSGYTENSIVHHGRLDAGVHLLQ
KPYRSDKLAQKVREVLDL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcggctggcgtgatcgaattcgccagtgatcgtgtcaccgacattttcgga
tacgcgcccgacgagcttgtcggcagctcgatcgaggtgctgatccccgaacgatttcgc
ggcgaacactccaatcagatcaaagcctatttccggaagccgacctcccgaatgatgggt
ggtggattgctgctgtctgggcgtcgtaaggacacgacggaattcccggccgagatcagc
atcagtccgatcatcgtagccgaccggcatgccgcgatcgctgcagtgagggacgtttcc
agccgcagaaccctcgaagcgctccagcaaggagcagcggaagccttgcgcgagagcgag
gagcgcctgagatatttcatcaaatactcgcccgccgcgatcgcgatgctcgataatgag
ctgcgttacatcgtctacagcgaccgctggctggtcgactacggtctcattggacgcgat
ctgcgcgggctgtcacattatgaagtctttcccgaaattccggaacgctggcgcgcgatt
caccgccgcgcccttgcgggcgagacacttcatgccgacgaggattcgttcacgagatcc
gacggacggctgcaatggctgcgctgggaggtacgcccctggttcgatgcgctcggcaac
atcggcggcgtcgccttcctgacggaagacatcacggaccgcaagcggatcgaagcgcaa
ctcgcacaggcgcagaagatggaagcgatcggccagttgactggcggcatcgcccatgac
tttaacaatttgctgactgtcgtcctcggcaacgcagaggtcctcaaggatgagatcaag
agcgacgatcttcgtaagctggtcgagccgatcatcgccgccgccgagcgcggcgcgagc
ctgacgcaactcatgctcgcctacgcgcgccgccaggcgctcgagcccagcacgttcgag
ctgaatgaggtcgtgacgcacatgaacgcgctgctgcggcgtaccatcggcgagaatgtc
gaagtcgaacttcgacttgcgaagccgttgtggagcgtgaccgccgatatccgccaaacc
gagactgccattctcaatatcgtcctcaatgcgcgcgatgcgatgccgcagggtggcaag
ctgacgatcgagacggccaacgtcgatctctcggacgattatgccgcgcacaacttggag
gtcaatccagggcagtacgtcatgatggccttgtccgacacgggcagcggcatcgccccg
gaaatgcgtgaccgcatcttcgagccgttcttcacgaccaagccggtcggcaaggggacg
ggactcggactcagcatggtctacggcttcgtcaagcagaccggcgggcacatccaggtc
tacagcgaagtcgggcacggcacgtgcatcaagatctatttgccgcgtgccgaagccggc
acgacgaccgctgtcccgtcttcacaggctccggaacccgccgcgaccggcgctgaatcc
atccttgtcgtcgaggacgatcctcatgtgcggatgtttgccgtccagcaattgcgccgc
ctgggttatcgggtgacggaggccggcgacggaccgtccgcgctcctggaagtttcgcgt
tccggagcgcccgatctgttgttcacggacgtcgtgatgcctggcggcatgaccggacgt
gaactcgcggagcggatcggacagagcgtcccaggcattcgggttctgttcacctcgggc
tataccgagaactcgatcgtccatcatggtcggctcgatgccggggtgcatctgctgcaa
aaaccctacaggagcgacaagctggcgcagaaggtgcgcgaggtgctggacctctga
DBGET
integrated database retrieval system
