Bradyrhizobium symbiodeficiens: CIT39_14780
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Entry
CIT39_14780 CDS
T06284
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsym03009
]
CIT39_14780 (rimO)
Enzymes [BR:
bsym01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CIT39_14780 (rimO)
Ribosome biogenesis [BR:
bsym03009
]
Prokaryotic type
ribosomal protein modification factors
CIT39_14780 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AWM07584
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All DBs
Position
3842083..3843408
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AA seq
441 aa
AA seq
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MDQTAAPKVSFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQ
ESLSAIGEAMAENGKVIVTGCMGAEPEAIEQAYPGVLSITGPQQYESVLDAVHRALPPAH
NPHVDLVPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPANDVLREAERLV
GAGVKELLVISQDTSAYGVDLKYAESPWKDRQVRARFLDLARELGELGAWVRLQYVYPYP
HVDEVIALMNEGKVLPYLDIPFQHASPEVLKAMKRPAAQDKTLARIKRWREECPDLALRS
TFIVGFPGETDADFEYLLNWLDEAEIDRLGCFKYEPVAGATANAIENPVPEEVKQERYNA
LMARQQKISARRLKRKVGTRQQIIIDEVGPTVAKGRSKADAPEIDGAVYLTSRRPLRVGE
IVTAKIERADQYDLHGSVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggatcagacggctgcgcccaaggtcagcttcgtgtcgctcgggtgtcccaaggcattg
gtggattccgagcgcatcatcacgcgcctgcgcgccgaggggtatgaactcgcccgcaag
catgacggggcggacatcgtcatcgtcaacacctgcggcttcctcgacagcgccaagcaa
gaatcgctctcggcgatcggcgaggccatggccgagaacggcaaggtgatcgtcacaggc
tgcatgggcgcggaaccggaagcgatcgagcaggcctatcccggcgtgctctcgattacg
ggcccgcagcaatatgagagcgtgctcgacgccgtgcaccgcgcgctgccgccggcccac
aatccacacgtggacctggtgccgccgcagggcatcaagctgacgccgcgccactacgcg
tatttgaagatttccgagggctgcaacaaccgctgcaccttctgcatcatcccgaagctg
cgcggcgatctcgtctcgcgccctgccaacgacgtgctgcgcgaggccgagcgcctggtc
ggcgccggcgtcaaggagctgcttgtcatttcgcaggacacttcggcctatggcgtcgat
ctcaaatatgcggagagcccgtggaaggaccgccaggtccgcgccagattcctcgacctc
gcacgcgagttgggcgagttaggtgcctgggtccgcctgcaatacgtctacccctacccg
catgtcgacgaggtcatcgcgctgatgaacgagggcaaggtgctgccctatctcgacatc
ccgttccagcatgcgagccccgaagtgctgaaggcgatgaagcgcccggcggcgcaggac
aagacgctggcgcgcatcaagcgctggcgcgaggaatgtcccgatcttgccttgcgctcg
accttcatcgtcggcttccccggcgagaccgacgccgatttcgaatacctcctcaattgg
ctggatgaggctgagatcgatcgtctcggctgtttcaagtacgagccggtcgcaggcgcc
acggcgaacgcgatcgagaacccggtgcccgaagaggtcaagcaggagcgctacaacgcg
ctgatggcccgacagcagaagatctcggcgcgcaggctgaagcgcaaggtcggcacccgc
cagcagatcatcatcgacgaggtcggtccgacggtggccaagggccgctccaaggccgat
gcgccggagatcgacggcgcggtgtatctgacgagccgccgtcccttgcgcgtcggcgag
atcgtcaccgcaaagatcgaacgcgccgaccagtatgatctgcacggcagcgtcgcgggg
ttctga
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