Bradyrhizobium symbiodeficiens: CIT39_15565
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Entry
CIT39_15565 CDS
T06284
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsym03400
]
CIT39_15565
DNA repair and recombination proteins [BR:
bsym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CIT39_15565
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
LppA
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
AWM07724
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All DBs
Position
3987358..3987771
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AA seq
137 aa
AA seq
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MDTLTAEERSARMALIKSKGTAPEVAVRRMARALGARYRGNRKDLPGNPDLAFGDQKRAV
FVHGCFWHRHDCQAGRRLPKSHVELWTEKFERNVARDRQVRRALAKRGWRSLIIWECELS
NPERASRRLERFLDARN
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atggacacgctcacggcagaagaacgaagcgcgcggatggcgttgattaaaagcaaaggt
accgcgcccgaggtcgcggttagacggatggcgcgcgcactcggcgcgagataccgcggc
aaccgtaaagacttgccgggaaatcccgacttggcgtttggcgaccagaagcgtgccgtc
tttgtgcacggatgcttttggcaccgtcacgattgtcaggcagggcgtcgcctgccaaag
tcgcacgtggagctctggacagaaaaattcgagcgaaacgtcgcacgagatcgccaggtc
cggcgcgcgctcgcgaagcgcggctggaggtcgctgataatctgggaatgcgaactctcc
aaccccgagcgcgcgtcaaggcgcttagagagattccttgatgcgcggaattga
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