Bradyrhizobium symbiodeficiens: CIT39_15705
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Entry
CIT39_15705 CDS
T06284
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00010
Glycolysis / Gluconeogenesis
bsym00020
Citrate cycle (TCA cycle)
bsym00260
Glycine, serine and threonine metabolism
bsym00280
Valine, leucine and isoleucine degradation
bsym00310
Lysine degradation
bsym00380
Tryptophan metabolism
bsym00620
Pyruvate metabolism
bsym00630
Glyoxylate and dicarboxylate metabolism
bsym00640
Propanoate metabolism
bsym00670
One carbon pool by folate
bsym00785
Lipoic acid metabolism
bsym01100
Metabolic pathways
bsym01110
Biosynthesis of secondary metabolites
bsym01120
Microbial metabolism in diverse environments
bsym01200
Carbon metabolism
bsym01210
2-Oxocarboxylic acid metabolism
bsym01240
Biosynthesis of cofactors
Module
bsym_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bsym_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bsym_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bsym_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CIT39_15705 (lpdA)
00020 Citrate cycle (TCA cycle)
CIT39_15705 (lpdA)
00620 Pyruvate metabolism
CIT39_15705 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CIT39_15705 (lpdA)
00640 Propanoate metabolism
CIT39_15705 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CIT39_15705 (lpdA)
00280 Valine, leucine and isoleucine degradation
CIT39_15705 (lpdA)
00310 Lysine degradation
CIT39_15705 (lpdA)
00380 Tryptophan metabolism
CIT39_15705 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CIT39_15705 (lpdA)
00670 One carbon pool by folate
CIT39_15705 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bsym04147
]
CIT39_15705 (lpdA)
Enzymes [BR:
bsym01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CIT39_15705 (lpdA)
Exosome [BR:
bsym04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CIT39_15705 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
NAD_binding_8
FAD_binding_3
DAO
Lys_Orn_oxgnase
AlaDh_PNT_C
Thi4
3HCDH_N
2-Hacid_dh_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AWM07750
LinkDB
All DBs
Position
complement(4018297..4019718)
Genome browser
AA seq
473 aa
AA seq
DB search
MADTSFDVIIIGSGPGGYVAAIRAAQLGLKTAIVEKSYLGGICLNWGCIPTKALLRSAEI
YHYMQHAGDYGLSAEKVSFDPKAVVQRSRGVSKRLNDGVGFLMKKNKVSVIWGAATIDAP
GKVTVKKSDVEAPKGALGEGSYQAKHIIVATGARPRVLPGLEPDKKLIWTYFEAMVPEKM
PKSLLVVGSGAIGIEFASFFHTMGSEVTVVEVLPQILPVEDAEIAGLARKRLEKQGIKIM
SSTKVTKLEKKADSVVATIDDGKGKPVTTEFERVISAVGVVGNIENLGLEKLGVKTERGC
VVIDGYGKTNVPGIYAIGDVAGPPMLAHKAEHEGVICVEAIKGLHPHPMDKLLIPGCTYC
NPQVASVGLTEAKAKEGGREIRVGRFPFVGNGKAIALGEDQGLVKVIFDKKTGQLLGAHM
VGAEVTELIQGYVVAMNLETTEEELMHTVFPHPTLSEMMKEAVLDAYGRVLNI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacatccttcgacgtcatcatcatcggctccggtcccggcggctacgtcgcc
gcgatccgcgccgcccagctcggcctcaagaccgcgatcgtcgagaagtcgtatctcggc
ggcatctgcctgaactggggttgtatcccgaccaaggcgctgctgcgctcggcggagatc
tatcactacatgcagcatgccggggattacggcctgtcggcggagaaggtgtcgttcgat
ccgaaggcggtggtgcagcgctcgcgcggcgtctcgaagcggctcaacgacggcgtcggc
ttcctgatgaagaagaacaaggtcagcgtgatctggggcgcggcgacgatcgacgcgccc
ggcaaggtcaccgtgaagaaatccgacgtcgaggcgccgaagggcgcgctgggcgagggg
agctatcaggccaagcacatcatcgtcgccaccggcgcgcgtccgcgcgtgctgccgggg
ctcgagcccgacaagaagctgatctggacctatttcgaggcgatggtcccggagaagatg
cccaaatcgctgctggtggtcggctccggcgcgatcggcatcgagttcgcttcgttcttc
cacaccatgggctcggaggtcaccgtcgtcgaggtgctgccgcagatcctgcccgtcgag
gacgccgagatcgcgggccttgcccgcaagcgcctggagaagcagggcatcaagatcatg
tcctcgaccaaggtgaccaagctcgagaagaaggccgacagcgtcgtcgccaccatcgac
gacggcaagggcaagcctgtcacgacagagttcgagcgcgtcatctccgccgtcggcgtc
gtcggcaacatcgagaatctcggcctcgaaaagctcggcgtgaagaccgagcgcggctgt
gtcgtgatcgacggctatggcaagaccaacgtccccggtatctacgccatcggcgacgtc
gcgggtcccccgatgctcgcacacaaggccgagcatgaaggcgtgatctgcgtcgaggcg
atcaagggcctgcacccgcatcccatggacaagctgctgatccccggctgcacctattgc
aatccgcaggtggcctcggtcggcctcaccgaagccaaggcgaaagaaggcggccgcgag
atccgcgtcggccgcttccccttcgtcggcaacggcaaggcgatcgcgctcggggaggat
cagggcctggtcaaggtcatcttcgacaagaagaccggccagctgttaggggcccacatg
gtcggcgccgaggtcaccgagctgatccagggctacgtcgtcgccatgaacctggagacc
acggaagaagagctgatgcacacggtattcccgcatccgaccctgtcggagatgatgaag
gaggccgtgctggatgcgtatggacgggtgttgaatatttga
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