Bradyrhizobium symbiodeficiens: CIT39_17430
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Entry
CIT39_17430 CDS
T06284
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00550
Peptidoglycan biosynthesis
bsym01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CIT39_17430
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bsym01002
]
CIT39_17430
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bsym01011
]
CIT39_17430
Enzymes [BR:
bsym01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CIT39_17430
Peptidases and inhibitors [BR:
bsym01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CIT39_17430
Peptidoglycan biosynthesis and degradation proteins [BR:
bsym01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CIT39_17430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Motif
Other DBs
NCBI-ProteinID:
AWM08054
LinkDB
All DBs
Position
4372361..4374190
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AA seq
609 aa
AA seq
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MLRKNLSSSRLARVGVFGLLTVTTAVIFTTDAAEARRHRRHYAHHRVQRDVSESSSPKFA
SIIVDGNSGAVLQATSPDGIRHPASLTKIMTLYLLFERLESGKMKLDTEMPVSQHAADQD
PTKLNLRAGQTIRVEDAIKGLVTRSANDAAVVIAEAIGGDEDDFAQMMTRKARSLGMSKT
VYRNANGLPNDEQVTTARDQATLGRAIQERFPRYYRYFATSTFNWRGQSIRNHNHLLGSV
EGVDGIKTGYTRASGFNLVTSMRRGNRHLIGVVLGGRSGGSRDAIMRNLLAENLEKGATT
HTVAAVTERNGADASTEIADASPAPARPVPQVQAASAPAPESAQSRLAARLSTLAAATAA
VPPAPIKPEVRATESRIEPAPLTNGVISSQPLSIIPGSSEPMKPVRVKTVQVKGGAVKIA
SAASAQVAPPITNAIPTRSDVAETSGAVVARADLINKPEIVSQSEAPKAEMARTELPRQP
TGFGTGNGILGVLPAATAAAPVPSAPKLASADPMSIQMSATTKPVVTHSGWIVQVGALES
ENEAQQRIDAARSSARGLLSKADPFTEPVVAKDNRKLYRARFAGLDRDQAEAVCRTLKRA
EISCMTVRN
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtaaaaacttgtcttcctcgcgcttggcgcgggttggcgttttcgggcttctt
acggtcaccaccgcggtcatcttcaccactgatgccgccgaggcgcggcgtcatcgccgc
cattacgcgcaccaccgggtgcagcgcgatgtgtccgagagttccagcccgaaattcgcg
tccatcatcgtcgacggcaattccggcgcggtgctgcaggcgaccagcccggacgggatc
cgccaccccgcctcgctcaccaagatcatgacgctctatctgctgttcgagcgtctcgag
tccgggaagatgaagctcgacaccgagatgccggtgtcccagcacgccgccgatcaggat
ccgaccaagctgaacttgcgcgccggccagaccattcgcgtcgaggacgcgatcaagggt
ctcgtcacccgctccgccaacgacgcagccgtcgtgatcgcggaagcgatcggcggcgac
gaagacgacttcgcccagatgatgacgcgcaaggcgcgctcgctcggcatgtccaagacg
gtgtaccgcaacgccaacggccttcccaacgacgagcaggtgacgaccgcgcgcgaccag
gccacgctcggccgcgccatccaggagcgcttcccgcgttactatcgctatttcgcgacc
tcgacgttcaactggcgcggacagtcgatccgcaaccacaatcacctgctcggcagtgtc
gagggcgtggacggcatcaagaccggctacacccgcgcctccggcttcaatctcgtgacc
tcgatgcgccgcggcaaccgtcatctgatcggtgtcgtgctcggcggccgcagcggcggc
tcgcgtgatgcgatcatgcgcaacctgctcgcggagaacctcgagaagggcgcgaccacc
cacaccgtcgccgcggtcacggagcgcaacggcgctgacgccagcacggaaatcgccgac
gcttcgcctgcgccggcccgtccggtcccgcaggttcaggccgcttctgcccctgctcct
gaatccgctcagtcgcgtctcgccgcacggctgtcgacgctcgcggctgcgacggccgcg
gtgccgccggccccgatcaagcccgaagtccgggcgacggaatccaggatcgagccggcg
ccgctcaccaacggcgtgatctcgagccagccgctctccatcatccccggctcgtccgag
ccgatgaagccggttcgggtcaagacggttcaggtcaagggcggcgccgtgaagatcgcc
tccgccgcctccgctcaggtcgccccgccgatcaccaacgccattccgacccggtccgac
gtcgcggaaacctccggcgccgtcgtcgcccgggccgatctcatcaacaagcccgaaatc
gtcagccagtcggaagcgccgaaggccgagatggcccgcaccgagttgccgcgtcagccg
acgggcttcggcaccggcaacggcatcctcggggtgctgccggccgcaacggccgccgcg
cccgtcccgtccgctccgaagctcgcctccgccgatccgatgtcgatccagatgagcgcc
accaccaagccggtggtcacccacagcggctggatcgtccaggtcggtgcgctcgagagc
gagaacgaggcccagcagcgcatcgacgccgcgcgcagttcggcccgcggcctgctcagc
aaggccgatccgttcaccgagcctgtcgtcgccaaggacaaccgcaagctctaccgcgcc
cgcttcgccgggctcgatcgcgaccaggccgaagcggtctgccgcaccctgaagcgcgcc
gagatctcctgcatgaccgtccgcaactga
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