Bradyrhizobium symbiodeficiens: CIT39_17880
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Entry
CIT39_17880 CDS
T06284
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
CIT39_17880
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
DUF3584
PSII_Ycf12
CCDC144C
Motif
Other DBs
NCBI-ProteinID:
AWM08126
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Position
4455017..4456444
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AA seq
475 aa
AA seq
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MRFVPIIALLGTACSLAAVYSAGPAVIGAAGSAADRASHALESARRLLVPAGREVPTFGS
DAPVFRYAAIQRGSIEQTVTVTGALQPVKTIEVGSQLSGQLARVYVDFNDTVAKDQPLAL
IDPRSFAAKVDEATASLAVANSLVDIARAKLDRARIDLQNARGNRDVLAAKVESAQAVKS
SAHKTLQRKLALQAQNVVATTAVDDAQTEFTARTAQEREAEVLMSLNSYSVEGAQADVRR
IEAELQQARMAVPEKAAVLAAAQADLDRTVIRSPIDGVVVGRFVNEGQTLAVGLESRTTF
VVAHRLEDMEIHAQVDEADIGRIVAGQRAHFTVDSYPDRRFEAVVRQVRKAPQTQQHVVT
YTVVLATSNLDGALLPGMTALVKIVIERQDDVLKVPLAALRFQPSGTRPEPAGTHSGVWV
RTASGSLQRIAVTVGAAGTEQVALKAGDLDEGSQVAVGQAIRPAGFEILGIRFGS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttgtaccaattattgccttgctcggaactgcatgcagcctcgccgcggtctac
agcgctgggccggccgtcatcggcgcggccggcagcgctgcggacagggcgtcgcacgcc
ctggaatcggccaggcgcctgctcgtgcccgccgggcgcgaagtcccgactttcgggtcg
gatgcgccagtattccgctacgccgcgatccagcgcggcagcatcgagcagaccgtcacc
gtcaccggcgccctgcagccggtcaagacgatcgaggtcggctcccaactgtccgggcag
ctcgcccgggtctatgtcgatttcaacgacaccgtcgccaaggaccagccgctcgccttg
atcgatccgcgcagctttgcggcgaaggtcgacgaagccacggcctccctcgccgtcgcc
aattccctggtcgacatcgccagggccaagctcgatcgcgcacggatcgacctgcagaac
gcccggggcaaccgcgacgtgctcgccgccaaggtcgagagcgcccaggcagtcaaaagc
tcggcgcataagaccctgcagcgcaagctggcgctgcaggcgcaaaacgtggtggcgacg
acggcggtcgacgacgcgcagaccgagttcaccgcccgcacggcccaggagcgcgaggcc
gaggtcctgatgtccctcaactcctattcggtggaaggcgcgcaggccgacgtccgccgc
atcgaggcggagctgcagcaggcccgcatggcggtgccggaaaaagcggccgttctcgct
gcagcccaggccgatctcgaccgcaccgtgatccgctcgccgatcgacggcgtcgtagtc
ggccggttcgtcaacgagggccagacactcgcggtcggactggaatcgcgcaccaccttc
gtggtcgcccaccgcctggaggacatggagatccacgcgcaagtcgacgaggccgatatc
ggccgcatcgtcgccggtcagcgcgcgcatttcaccgtcgactcctacccggaccgccgc
ttcgaggcggtggtgcggcaggtgcgcaaggcaccgcagacccagcagcacgtcgttacc
tacaccgtggtcctggcgacttccaatctggacggcgcgctgctccccggaatgaccgcc
ctggtgaagatcgtgatcgagcggcaggacgacgttctgaaggtgccgctcgccgcgctg
cgcttccagccctccggcactcggccggaaccggccggcacgcacagcggcgtgtgggtg
cgcactgccagcggctcgctccagcgcatcgccgtgacggtcggcgcagccggtaccgag
caagtcgcgctcaaggccggagatctcgacgagggcagccaggtggccgtcggccaggcc
attcgtccggcgggctttgaaattctcggaatcaggttcggatcatga
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