Bradyrhizobium symbiodeficiens: CIT39_18225
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Entry
CIT39_18225 CDS
T06284
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CIT39_18225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsym03021
]
CIT39_18225
03400 DNA repair and recombination proteins [BR:
bsym03400
]
CIT39_18225
Enzymes [BR:
bsym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CIT39_18225
Transcription machinery [BR:
bsym03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CIT39_18225
DNA repair and recombination proteins [BR:
bsym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CIT39_18225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
DUF4249
Motif
Other DBs
NCBI-ProteinID:
AWM08187
UniProt:
A0A2U8QDD1
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All DBs
Position
complement(4517045..4518076)
Genome browser
AA seq
343 aa
AA seq
DB search
MGETVTIQKNWQELIRPNKLQVQPGSDPSRFATIVAEPLERGFGQTLGNALRRILLSSLQ
GAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKSGPGVVTA
GDIQTVGDVVVLNPDLQICTLDEGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDSL
YSPVRKVSYKVENTREGQILDYDKLTMTIETNGALTPDDSVAYAARILQDQLNVFVNFEE
PRKEVAQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacagtgacgatccagaaaaattggcaagaactgattcgaccgaacaagctc
caggtgcagcccggcagcgatccctcgcgttttgcgaccatcgtcgccgagccgctcgag
cgcggcttcggccagacgctcggcaacgcgctgcgccgcatcctgctctcctcgctccag
ggcgcagcggtgcagtcggtgcacatcgacggcgtgctgcacgagttctcctcgatcgcg
ggcgttcgtgaggacgtcaccgatatcgtgctcaacatcaaggacatctcgatcaagatg
cagggcgaaggccccaagcgcatggtcgtgaagaagtccggcccgggcgtcgtcaccgca
ggcgacatccagaccgtcggcgacgtcgtcgtgctcaacccggacctgcagatctgcacc
ctcgacgagggcgccgagatccgcatggagttcacggtggccaccggcaagggctacgtg
cccgccgagcgcaaccgtcccgaggatgcgccgatcggcctgatcccggtcgacagcctg
tactcgccggtccgcaaggtctcctacaaggtcgagaacacccgtgagggtcagatcctc
gactacgacaagctgaccatgacgatcgagaccaacggcgcgctgacgccggatgattcg
gtggcctatgccgctcgcatcctccaggatcagctcaacgtgttcgtcaacttcgaagag
ccgcgcaaggaagtcgcccaggagatcatcccggacctcgccttcaacccggccttcctc
aagaaggtggacgagctcgaactgtcggtgcgctcggccaattgcttgaagaacgacaac
atcgtctacatcggcgacctcgtccagaagagcgaagccgaaatgctccgcaccccgaac
ttcggccgcaagtcgctgaacgagatcaaggaagtgctggcccagatgggtctgcatctc
ggcatggaagtgccgggctggccgccggagaacatcgacgagctcgccaagcgcttcgag
gatcactactga
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