Bradyrhizobium symbiodeficiens: CIT39_19490
Help
Entry
CIT39_19490 CDS
T06284
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIT39_19490 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsym03019
]
CIT39_19490 (groL)
03110 Chaperones and folding catalysts [BR:
bsym03110
]
CIT39_19490 (groL)
03029 Mitochondrial biogenesis [BR:
bsym03029
]
CIT39_19490 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bsym04147
]
CIT39_19490 (groL)
Enzymes [BR:
bsym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CIT39_19490 (groL)
Messenger RNA biogenesis [BR:
bsym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CIT39_19490 (groL)
Chaperones and folding catalysts [BR:
bsym03110
]
Heat shock proteins
HSP60 / Chaperonin
CIT39_19490 (groL)
Mitochondrial biogenesis [BR:
bsym03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CIT39_19490 (groL)
Exosome [BR:
bsym04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CIT39_19490 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CIT39_19490 (groL)
Exosomal proteins of breast cancer cells
CIT39_19490 (groL)
Exosomal proteins of colorectal cancer cells
CIT39_19490 (groL)
Exosomal proteins of bladder cancer cells
CIT39_19490 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
LCIB_C_CA
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
AWM08400
UniProt:
A0A2U8QDZ0
LinkDB
All DBs
Position
4760318..4761958
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVKFGVDARDKMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEI
ELDDKFENMGAQMVREVASKSADAAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGI
DMAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDAEIGKFLADAMKKVGNEGVITVEEA
KSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAYILINEKKLSSLNELLPLLEAV
VQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQA
ISEDLGIKLENVTLNMLGRAKKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVPGGGVALL
RASEQLKGLRTKNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKVLENKTYAYGFD
SQTGEYGDLVKKGIIDPTKVVRAAIQNAASVAALLITTEAMVAELPKKGGAGPAMPPGGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtcaaattcggcgtcgatgcacgcgacaagatgctgcgtggcgtc
gacatcctcgccaacgccgtcaaggtgacgctcggcccgaagggccgcaatgtcgtcctc
gacaagtcgttcggcgctccccgcatcaccaaggacggcgtcaccgtcgccaaggagatc
gaactcgacgacaagttcgagaacatgggcgcgcagatggtgcgcgaagtcgcctccaag
tccgctgacgcggccggcgacggcaccaccaccgcgaccgtgctggcgcaggcgatcgtg
cgcgaaggcgccaagtcggttgccgccggcatgaacccgatggacctcaagcgcggtatc
gatatggcggtggaagccgtcgttgcggacctcgtcaagaactccaagaaggttacctcg
aacgacgagatcgcccaggtcggcaccatctcggccaacggtgacgcggagatcggcaag
ttcctcgccgacgccatgaagaaggtcggcaacgagggtgtcatcaccgtcgaggaagcc
aagtcgctcgagaccgagctcgacgtcgtcgagggcatgcagttcgaccgcggctacatc
tcgccctacttcgtcaccaacgccgacaagatgcgcgttgagatggacgacgcctacatc
ctcatcaacgagaagaagctctcctcgctgaacgagctgctcccgctgctcgaggccgtg
gtacagaccggcaagccgctggtcatcgtcgccgaggacgtcgaaggcgaagctctcgcc
acgctcgtcgtgaaccgcctccgtggcggcctgaaggtcgcggccgtcaaggctccgggc
ttcggcgatcgccgcaaggcgatgctgcaggacatcgcgatcctgaccggtggccaggcg
atctcggaagatctcggcatcaagctcgagaacgtcacgctcaacatgctcggtcgcgcc
aagaaggtgatgatcgacaaggagaacaccacgatcgtcaacggcgccggcaagaaggcc
gacatcgaggcacgcgtggcccagatcaaggcgcagatcgaggaaaccacctcggactac
gaccgtgagaagctccaggagcgtcttgccaagctcgctggcggcgtcgcggtgatccgc
gtcggcggcgcgaccgaggtcgaggtcaaggagcgcaaggatcgcgttgatgacgcgatg
catgcgacccgcgcggctgtcgaagaaggtatcgtcccgggcggcggcgtcgccctgctc
cgtgcttccgagcagctcaagggcctgcgcaccaagaacgacgaccagaagaccggcgtc
gagatcgtgcgcaaggcgctctccgcgcccgctcgccagatcgcgatcaacgccggtgaa
gacggctccgtgatcgtcggcaaggtgctcgagaacaagacctacgcctacggcttcgac
tcccagaccggcgagtacggcgatctggtcaagaagggcatcatcgacccgaccaaggtg
gttcgcgcagcgatccagaacgcagcttcggttgcggccctgctgatcaccacggaagcc
atggtcgccgagctgcccaagaagggcggcgccggcccggcaatgccccccggcggcggc
atgggcggcatggacttctaa
DBGET
integrated database retrieval system
