Bradyrhizobium symbiodeficiens: CIT39_20355
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Entry
CIT39_20355 CDS
T06284
Name
(GenBank) PAS domain-containing protein
KO
K13587
two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:
2.7.13.3
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CIT39_20355
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bsym01001
]
CIT39_20355
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
bsym02022
]
CIT39_20355
Enzymes [BR:
bsym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
CIT39_20355
Protein kinases [BR:
bsym01001
]
Histidine kinases
Cell cycle family [OT]
CIT39_20355
Two-component system [BR:
bsym02022
]
Cell cycle family
CckA-CtrA/CpdR (cell cycle control)
CIT39_20355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
Response_reg
HATPase_c
PAS
PAS_9
HisKA
DUF3040
PAS_10
BRO1
Motif
Other DBs
NCBI-ProteinID:
AWM08556
UniProt:
A0A2U8QED5
LinkDB
All DBs
Position
complement(4925625..4928204)
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AA seq
859 aa
AA seq
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MTAESDHDLTREPVATHEPSPRSGSIALVLLVAAGLVAVAVGLMTLGRVQAQPYILGILA
VLAMVGLFNLFAFAAGIIRFADRSLDDPVVGRIADHGFDGLAVTDPRGHVVYSNAAYLTL
TGASGPQDVRPVERVFIGNPDVSEAVFRLLKAAREGKRQQEEVRISGQDGSQGRWLRMRV
RPLGTGKREAKYAVWSIADITRDRERQEDVFQELQHAIEYLDHAPCGFFSVNPAGELAYV
NATLANWLDYDLAEIGSGGLKLTDIVSGDGASLLTSIVAVPGEVKTEVFDIDLRMRTGKT
MPVRLYHKLAFGADGAPGPSRTLVISRARDERSDPDRAAEVRFMRFFDHTPMAIATVDRA
GNVVRSNARYAKLGQALGLDSASKSIFRAVNSRDRHLLIAAINQAAEGQADVAPVEVALE
GPRERWGQFFVTPVDAAENEAEAAIVHMLETTERRALENQINQSQKMETVGQLAGGIAHD
FNNVLSAIMMANDFLLNAHKPTDPSFQDIMQIKQNATRAATLVRQLLAFSRRQTLRPQVL
DLGDALSDLAMLLRRLIGEKVKHETIHGRDLWPVKVDVSQFEQVIVNLAVNARDAMPDGG
KLIIRTANVTADEAARLAYKGMPAADYVRIEVADTGTGIPADIRDKIFEPFFSTKEVGKG
TGLGLSTVYGIVKQTGGFIYVDSAPGQGTSFHIFLPRHHAEPEAQVEQPAAAVSATNGAG
KDAAAAEAKPRTDLTGQGTILLVEDEEGLRALNARGLRSRGYTVVEAENGVDAMEVLEEQ
SGAIDLVVSDVVMPEMDGPTLLKAMREKKPDIKFIFVSGYAEDAFEKSLPEGQQFDFLPK
PFTLSQLVAAVKETMAKQG
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgagtccgaccacgatctcacccgcgagcccgttgcgacgcacgagccgtcg
ccgcgctcgggcagcattgcgctggtgctgctggtggccgccggcctcgtcgccgtcgcc
gtcgggctgatgacgctcgggcgcgtgcaggcgcagccctatatcctcggcatccttgcc
gtgctggcgatggtcggcctgttcaacctgttcgctttcgccgccgggatcatccgcttc
gccgaccgcagcctcgatgatccggtcgtggggcgtatcgccgatcacgggttcgatggc
ctcgccgtgaccgatccgcgcggccacgtggtctattccaacgccgcctatctgacgctc
accggcgccagcggtccgcaggacgtgcgcccggtcgagcgtgtcttcatcggcaatccc
gacgtttcggaggccgtgttccgcctgctcaaggccgcgcgcgaaggcaagcggcagcag
gaagaggtccgcatctccggccaggacggcagccagggccgctggctgcgcatgcgggtg
cgcccgctcggcaccggcaagcgcgaggcgaaatacgcggtgtggtcgatcgccgacatc
acccgcgaccgcgaacgccaggaggacgtgttccaggagctccagcacgccatcgaatat
ctcgaccacgcgccgtgcgggttcttctcggtcaatccggccggggaactcgcttacgtc
aacgcgacgctggcgaactggctcgactacgacctcgccgagatcggctcgggcggcctc
aagctgaccgacatcgtctccggcgacggcgcctcgctgctgacctcgatcgtggcggtg
ccgggcgaggtgaagaccgaggtcttcgacatcgacctgcggatgcgcaccggcaagacc
atgccggtgcggctctatcacaagctcgcctttggcgccgacggcgcgccgggcccgtcg
cgcacgctcgtgatcagccgcgcccgcgacgagcgcagcgatcccgatcgtgccgccgaa
gtgcgcttcatgcgcttcttcgaccatacgccgatggcgattgcgaccgtggaccgcgcc
ggcaacgtggtacggtccaacgcgcgctatgccaagctcgggcaggcgctcgggctcgac
agcgcctccaagtcgatcttccgcgcggtgaattcgcgcgaccgtcacctcctgatcgcg
gccatcaaccaggccgccgaaggccaggccgacgtcgcgccggtggaagtggcgctggaa
gggcccagggagcgctggggccagttcttcgtcacgccggtggatgcggccgagaacgag
gcggaagccgccatcgtgcacatgctcgagaccaccgagcggcgcgcgctggagaaccag
atcaaccagtcgcagaagatggagacggtcggccagctcgccggcggcatcgcccacgac
ttcaacaacgtgctctccgccatcatgatggcgaacgacttcctgctgaacgcgcacaag
ccgaccgatccgtcgttccaggacatcatgcagatcaagcagaacgcgacgcgggctgcc
acgctggtgcggcagctgctggcgttctcgcggcggcagacgctgcggccgcaggtgctc
gatctcggcgatgcgctgtccgatctcgccatgctgctgcgccgcctgatcggcgagaag
gtcaagcacgagaccatccacggccgcgatctctggccggtcaaggtcgacgtctcccag
ttcgagcaggtgatcgtcaatctcgcggtgaacgcgcgcgacgccatgcccgacggcggc
aagctgatcatccgcaccgccaacgtcaccgcggatgaagcggccaggctcgcctacaag
ggtatgccggctgcggattatgtccgcatcgaggtcgccgacaccggcaccggcattccc
gccgacatccgcgacaagattttcgagccgttcttctcgaccaaggaagtcggcaagggc
accggcctcgggctttccaccgtctacggcatcgtcaagcagaccggcggcttcatctac
gtcgattccgcgccgggacagggcacctcgttccacatcttcctgccgcgtcaccatgcc
gagccggaagcgcaggtcgagcagccggcggctgcggtcagcgcgaccaacggcgccggg
aaggacgccgcggcggccgaggccaagccgcgcaccgatctcacggggcagggcaccatc
ctgctggtcgaggacgaagagggcctgcgcgcgctgaacgcacgcggattgcgctcgcgc
ggctacaccgtggtcgaggccgagaacggcgtcgacgccatggaagtgctggaggagcag
agcggggcgatcgatctcgtcgtctccgacgtggtcatgcccgagatggacggcccgacg
cttttgaaggcgatgcgggagaagaagcccgacatcaaattcatcttcgtctccggctat
gccgaggacgccttcgagaagagcctgcccgagggacagcagttcgacttcctgccgaag
ccgttcacgctcagccagctggtggcggcggtgaaggagacgatggcgaagcaggggtga
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