Bradyrhizobium symbiodeficiens: CIT39_21070
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Entry
CIT39_21070 CDS
T06284
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00061
Fatty acid biosynthesis
bsym00071
Fatty acid degradation
bsym01100
Metabolic pathways
bsym01212
Fatty acid metabolism
bsym02024
Quorum sensing
bsym04146
Peroxisome
Module
bsym_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CIT39_21070
00071 Fatty acid degradation
CIT39_21070
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CIT39_21070
09145 Cellular community - prokaryotes
02024 Quorum sensing
CIT39_21070
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bsym01004
]
CIT39_21070
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bsym04147
]
CIT39_21070
Enzymes [BR:
bsym01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CIT39_21070
Lipid biosynthesis proteins [BR:
bsym01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CIT39_21070
Exosome [BR:
bsym04147
]
Exosomal proteins
Exosomal proteins of breast milk
CIT39_21070
Exosomal proteins of breast cancer cells
CIT39_21070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF764
Motif
Other DBs
NCBI-ProteinID:
AWM08688
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All DBs
Position
5089396..5091327
Genome browser
AA seq
643 aa
AA seq
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MMDYVGRVAQADTYPKMLRLNAREHGNKIALREKDLGLWRVFTWNDYQTRVRDFALGLLE
MGLGRGDVIGIIGDNRPDWVAAEVATHAIGGLSLGLYRDVLDEEASYLLNYGEAQLVFAE
DEEQVDKLLTLADRAPKLKHIIYSDPRGMRKYDDPRLMSAEKFAELGRARAAREPELYDR
LVDATKGEDVAILCTTSGTTSHPKLAMLAAGRVLGHCATYLTFDPKGPDDEYVSVLPLPW
IMEQVYVLGKGLLCRMKINFVEEPETMMNDLREIAPTFVLFAPRVWESIAADVRAKVMDA
TPLKQGLFDLGMKSGLAALEQGKRSGLADAILFRALRDRLGFTRLRSAATGGAALGPETF
KFFQAMGVPLRTLYGQTELLGAYTLHPEGKVDPDTTGVPMSDQVEIRIDNADVHGVGEIV
VRHPNMFLGYYKNPEASVADIKDGWMLSGDAGYFNANRQLVVIDRIKDLAETSRGERFSP
QFIENKLKFSPYIAEAVVLGAGRDALAAMICIRYSIISKWAEKSRLSFTTYSDLASRPEV
YALLRKEVETVNATLPPAQRISRFLLLYKELDADDGELTRTRKVRRSVINEKYEGIIDAI
YRGDADIPVDTVIRFQDGTTQRVRTTLRVVDLGGHGHMAEAAE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatggattacgtaggccgcgtcgcccaggccgacacctatccgaagatgctcaggctc
aatgccagggagcacggcaacaagattgccctgcgcgagaaggatctcgggctctggcgc
gtgttcacctggaatgactaccagacgcgggtgcgcgatttcgcgctcggtcttctcgaa
atgggccttggccgcggcgacgtcatcggcatcatcggcgacaaccggccggactgggtc
gcggctgaagtggcgacgcacgccatcggcggcctaagcctcggactttatcgcgacgtg
ctggatgaagaggcctcctatctcctcaactatggcgaggcacagctcgtcttcgccgag
gacgaggagcaggtcgacaagctgcttaccctcgccgaccgcgcgccgaagctgaagcac
atcatctattccgatccgcgcgggatgcggaaatacgacgatcccaggctgatgtcggcg
gagaagttcgcggagctgggccgcgcccgcgccgcgcgcgagcccgagctgtacgacaga
ctggtggatgccaccaagggcgaagacgtcgcgatcctctgcacgacctcgggcacgacg
tcgcatcccaagctcgcgatgctggccgccggccgcgtgctcggccactgtgcgacctat
ctcactttcgatccgaagggaccggacgacgaatacgtctcggtgctcccgctgccgtgg
atcatggagcaggtctacgtgcttggcaaaggtctgctttgccggatgaagatcaacttc
gtcgaagagcccgagacgatgatgaacgatctgcgcgagatcgcgccgacgttcgtcctg
ttcgcgccccgcgtctgggaatcgatcgccgcggacgtccgcgccaaggtgatggacgcc
acgcctctcaagcaaggcctgttcgatctcgggatgaagtcaggccttgccgcgctcgag
caaggcaagcgctcaggccttgccgacgccatcctgttccgcgcgctgcgcgaccgcctc
ggcttcacccggctgcgctcggccgcgaccggcggcgcggcgctcgggccagagaccttc
aagttcttccaggccatgggcgtgccgctgcgcacgctctatggccagaccgagctgctg
ggggcctacacgctgcaccccgagggcaaggtcgatcctgataccaccggcgtgccgatg
tccgaccaagtcgagatccgcatcgacaatgccgacgtccatggcgttggcgagatcgtg
gtgcggcatcccaacatgttcctcggatattacaagaatcccgaggccagcgtcgccgac
atcaaggacggctggatgctgtcgggcgatgccggctatttcaacgccaaccggcagctc
gtcgtcatcgaccgcatcaaggatctcgccgagacctcgcgcggcgagcgcttctcgccg
cagttcatcgagaacaagctgaagttctcgccctatatcgccgaagcggtggtgctcggg
gccggtcgcgacgcgctcgcggcgatgatctgcatccgctactccatcatctcgaaatgg
gcggagaagagccgcctttccttcacgacttatagcgatctcgcctcgcggccggaggtc
tatgcattgctccgcaaggaggtcgagaccgtcaacgccacgctgccgccggcccagcgc
atctcgcgcttcctgctgctctacaaggagctggacgccgacgacggcgagctcacccgc
acgcgaaaggttcgccgcagcgtcatcaacgagaaatatgaaggcatcatcgatgccatc
taccgcggcgatgccgacatccccgtcgacaccgtgatccgcttccaggacggcaccacg
cagcgcgtgcggacgacgttgcgcgtggtggatctgggtgggcacgggcacatggcggag
gcggcggagtga
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