Bradyrhizobium symbiodeficiens: CIT39_21475
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Entry
CIT39_21475 CDS
T06284
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bsym03000
]
CIT39_21475
Transcription factors [BR:
bsym03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CIT39_21475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crp
HTH_Crp_2
cNMP_binding
HTH_20
HTH_DeoR
MarR
HTH_24
MarR_2
HTH_11
LexA_DNA_bind
TrmB
DUF7343
HTH_5
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AWM08760
LinkDB
All DBs
Position
complement(5185456..5186169)
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AA seq
237 aa
AA seq
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MKPSVVTIEPNGHFCSDCAVRGAAVCSSLNTAELREFEHLGRRVHFDSGETVFSEEDITT
SFYNVLEGVMRLYKLLPDGRRQIVGFALPGDFLGMNISGRHNFSADAIGVVTVCQFAKAP
FGRFIEDRPQLLKRINELAIRELSQARDHMVLLGRRSADEKVATFLLGWRERLVTLKGLS
DTVPLPMSRQDIADYLGLTIETVSRTFTKLERQGVIEIIHGGISLLDPARAEAMAAA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttccgtggtcacgattgagccgaacgggcatttttgcagcgattgtgccgta
cgcggagcggcggtttgttcgtcgctgaatacggccgaactcagggaattcgagcatctc
ggacgccgcgttcatttcgactccggcgagaccgtcttctccgaggaggacatcacgacc
tcgttctacaacgtcctcgaaggcgtcatgcggctgtacaagctgctgcccgatggccgg
cggcagatcgtcggttttgccttgcccggcgatttcctggggatgaacatctccggtcgg
cacaatttttcggccgatgcgatcggcgtcgtgaccgtgtgtcagttcgccaaagcgccc
ttcggccgtttcatcgaagaccggccgcaattgctcaagcggatcaacgaactggccatc
cgtgaactgagccaggcccgcgatcacatggtcctgctcggccgccgctcggccgacgag
aaggttgcgacctttctgctcggctggcgcgagcggctggtcacgctcaaggggttgtcc
gacacggttccgcttccgatgagccgtcaggacatcgccgactatctcggcctgaccatc
gaaaccgtcagccgcaccttcaccaagctggagcgtcagggcgtgatcgagatcattcac
ggcggtatcagcctgctggatcccgcccgtgccgaggcgatggccgcagcctga
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