Bradyrhizobium symbiodeficiens: CIT39_23805
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Entry
CIT39_23805 CDS
T06284
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00470
D-Amino acid metabolism
bsym00550
Peptidoglycan biosynthesis
bsym01100
Metabolic pathways
bsym01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CIT39_23805
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CIT39_23805
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CIT39_23805
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bsym01011
]
CIT39_23805
Enzymes [BR:
bsym01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CIT39_23805
Peptidoglycan biosynthesis and degradation proteins [BR:
bsym01011
]
Precursor biosynthesis
Amino acid ligase
CIT39_23805
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
CBD_PlyG
Motif
Other DBs
NCBI-ProteinID:
AWM09156
LinkDB
All DBs
Position
complement(5683993..5684979)
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AA seq
328 aa
AA seq
DB search
MHITILFGGTNRERLVSVASAQALHQALPEADLWWWDVEDKVHAVQSKQLLEHARPFEDE
FKPGTSGIPLEQALDQARAEDRVLVLGLHGGRAENGELQVMCEARGVPFTGSGSASSHLA
FDKIAAKHFAALGGVTPPANIALDNIDEAFAEYGRLIAKPARDGSSYGLIFVNAKQDLVA
VRNAAKHEEYVIEPYIAGVEATCGVLERTDGSIISLPPIEIIPGEGNFDYAAKYLLKSTQ
EICPGRFSPEITAALKAQAMLAHRAMSCTGYSRSDFIVSDRGLVYLETNTLPGLTKSSLY
PKALKAEGIEFVDFLRGLVELAGRGVRK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaccatcctcttcggcggtaccaaccgcgagcgtctggtttcggtcgcctcg
gcccaggccctgcatcaggcgttgcccgaggccgatctgtggtggtgggacgtcgaggac
aaggtgcacgccgttcagtcgaagcaactgctcgaacatgcccgccccttcgaggacgag
ttcaagcccggaacatcaggcatcccgctggagcaggcgctcgatcaggccagggccgag
gatcgggtgctggtgctcggcctgcatggcgggcgcgccgagaacggcgaattgcaggtg
atgtgcgaagcgcgcggcgtacccttcaccggctcgggttcggcgtcctcgcatctggcc
ttcgacaagatcgcggccaagcatttcgccgcgctcggcggggtgacgccgccggcaaac
attgcgctcgacaacatcgacgaggccttcgccgaatacggcaggctgatcgcaaagccg
gccagggacggctcgagttacggcctgatcttcgtcaatgccaagcaggatctcgtcgcc
gtccgcaacgcggccaagcacgaagagtatgtgatcgagccctatatcgccggcgtcgag
gcgacctgcggcgtgctggagcgcaccgatggttcgatcatctcgctgccgccgatcgag
atcattccgggtgagggcaatttcgactacgccgcaaaatatctcctgaagtcgacccag
gagatctgccccgggcgcttttcacccgagatcaccgccgcgctgaaggcgcaggcgatg
ctggcgcaccgcgcgatgtcctgcaccggctattcccggtcggacttcatcgtctcggac
aggggcctcgtttatctcgagaccaacacgctgcccgggctgaccaagtcctcgctctac
cccaaggcgctgaaagccgagggcatcgagttcgtcgacttcctgcggggcctggtcgag
ctcgccgggcggggcgtgcgaaaatag
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