Bradyrhizobium symbiodeficiens: CIT39_23835
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Entry
CIT39_23835 CDS
T06284
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00470
D-Amino acid metabolism
bsym00550
Peptidoglycan biosynthesis
bsym01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CIT39_23835 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CIT39_23835 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bsym01011
]
CIT39_23835 (murD)
Enzymes [BR:
bsym01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CIT39_23835 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bsym01011
]
Precursor biosynthesis
Amino acid ligase
CIT39_23835 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
KARI_N
AdoHcyase_NAD
ADH_zinc_N
UDPG_MGDP_dh_N
TrkA_N
Caskin1-CID
Motif
Other DBs
NCBI-ProteinID:
AWM09162
LinkDB
All DBs
Position
complement(5690427..5691824)
Genome browser
AA seq
465 aa
AA seq
DB search
MIPVTSFAGKTVAVFGLGGSGLASCHALKAGGAEVIAADDNAENVAKAAQAGFITADLRN
VSWTNFAALVLAPGVPLTHPVPHWSVLKAREAGVEVIGDIELFCRERRRHAPNAPFVAIT
GTNGKSTTTALIAHLTRFAGYDTQMGGNIGTAILSLEPPRMGRVHVIEMSSYQIDLTPSL
DPSVGILLNVSEDHIDRHGTIEHYAAVKERLVAGVQDGGTAIVGVDDGFCRDIADRLDRA
GKTVVRISVKNPLASGIHVEHGNIVRTAGGARSEVAALGGIGSLRGQHNAQNAACAAAAA
LAMGISLDVLQSGLRSFPGLAHRMEQVGRRGNVLFVNDSKGTNADATAHALSSFADIFWI
AGGKPKAGGITGLTGFFPRIRKAYLIGEAAQEFSGTLGTVAHEISQTLDVAVEHAARDAE
ASGLTDAVVLLSPACASFDQYRNFEIRGTKFRELVQALPGVKPVV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgtcacgtcctttgccggcaagaccgtcgcggtgttcggcctcggcggctcg
gggcttgcctcctgtcacgcgctgaaggccggtggtgccgaggtgatcgccgcggacgac
aatgcggagaatgtcgccaaggccgcgcaggccggcttcatcaccgccgatctgcgcaat
gtgtcctggacgaattttgcagccctcgtgctcgcgcccggcgtgccgctcacccatccg
gtgccgcactggagcgtgctgaaggcgcgcgaggcaggcgtcgaggtgatcggcgacatc
gagctgttctgccgtgagcgccgccgccacgcaccgaacgcgccgttcgtcgccatcacc
ggcaccaacggcaaatcgaccacgacggcgctgatcgcgcatctgaccaggttcgcgggc
tacgatacccagatgggcggcaatatcggcaccgcgatcctgtcgctggagccgccgcgc
atgggccgcgtccacgtcatcgagatgtcgtcctaccagatcgacctcacgccttcgcta
gatccctccgtcggcattctgctgaacgtcagcgaggaccacatcgatcgccacggcacc
attgagcactatgccgcggtgaaggagcgcctggttgccggcgtgcaggacggcggcacc
gcgatcgtcggcgtcgacgacggcttttgccgcgacatcgccgaccggctcgaccgcgcc
ggcaagaccgtggtgcgcatctccgtcaagaacccgctcgcgtcaggcatccatgtcgag
cacggcaatatcgtgcgcaccgcgggcggcgcccgcagtgaggtcgctgcgctcggcggc
atcggttcgctgcgcggccagcacaacgcgcagaacgcggcctgcgctgccgctgccgcg
cttgcgatgggcatcagccttgatgtgctgcagagcggcctgcgcagctttcccggcctt
gcccaccgcatggagcaggtcggccgccgcggcaacgtgctgttcgtcaacgattccaag
ggcaccaacgccgacgctaccgcgcatgcgctgtcgtcctttgccgacatcttctggatc
gccggtggcaagccgaaggccggcggcatcactggcctgaccggcttcttcccgcgcatc
cggaaagcctatctgatcggcgaggccgcgcaggagttttcgggaacgctcggcacggtg
gcgcatgagatcagccaaaccctcgacgtcgccgtcgagcacgccgcgcgcgatgcggaa
gcctcaggcctgaccgacgcagtcgtgctgttgtcgccggcctgcgcctccttcgaccaa
taccgcaacttcgaaatccgcggcaccaagttccgagaactggtgcaggcgctgccgggc
gtgaagccggtggtgtga
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