Bradyrhizobium symbiodeficiens: CIT39_24140
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Entry
CIT39_24140 CDS
T06284
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIT39_24140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsym03400
]
CIT39_24140
Enzymes [BR:
bsym01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
CIT39_24140
DNA repair and recombination proteins [BR:
bsym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIT39_24140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWM09217
LinkDB
All DBs
Position
5755225..5755767
Genome browser
AA seq
180 aa
AA seq
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MANTGIHRLPDQLRPNLRLVFVGTAASTRSAELGHYYAHPGNRFWRALHEAGITPRRYQP
GEFASLIELGIGFTDLSKTGAGMDHQIAAETIDVPGFRAKMETYRPRTIAFTSKKAASLF
YGRPSTAIRLGRQMRNEDLPEIFVLPSPSGAASGHWTLEPWRELAAWIAALDAQRPQTSS
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
ttggctaacactgggatccaccgcctccccgaccaactccgcccaaacctccgcctcgtc
ttcgtcggcaccgccgcctcgacgcgctcggccgaactcgggcattactacgcccatccc
ggcaaccgcttctggcgcgcgctgcatgaggccgggatcacgccgcggcgctatcagcca
ggcgaattcgcgtcgctgatcgagcttgggatcggcttcaccgatctctccaagacgggc
gcgggaatggatcaccagatcgcagcggagacgatcgacgtgccgggcttcagggcgaag
atggagacgtaccggccgcgaacgattgcgttcacgagcaagaaggcggcgagcttgttc
tacggccggccgtcaacggcgattaggctggggcggcagatgcgcaatgaggatttgccg
gagatctttgtgctgccctcgccgtcgggcgcggcgtccgggcattggacgctggagccg
tggcgggagcttgcggcgtggatcgctgcactcgacgcacaacgcccacagacctcatcc
tga
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