Bradyrhizobium symbiodeficiens: CIT39_25365
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Entry
CIT39_25365 CDS
T06284
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym02020
Two-component system
bsym02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CIT39_25365
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CIT39_25365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
bsym02022
]
CIT39_25365
02035 Bacterial motility proteins [BR:
bsym02035
]
CIT39_25365
Two-component system [BR:
bsym02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
CIT39_25365
Bacterial motility proteins [BR:
bsym02035
]
Flagellar system
Flagellar assembly proteins
Others
CIT39_25365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Response_reg
AAA_3
AAA
AAA_19
HTH_Tnp_ISL3
AAA_2
AAA_22
AAA_PrkA
MCM
HTH_30
AAA_7
nSTAND3
HTH_50
TIP49
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
AWM09439
LinkDB
All DBs
Position
5999419..6000804
Genome browser
AA seq
461 aa
AA seq
DB search
MRLLIVGTLKGQLTTATKIAMDNGATVTHAEDHDQAMRVLRGGKGADLLLVDVALDIRDL
VMRLEAEHIHAPIVACGITNDARAAVAAIHAGAKEYIPLPPDPELIAAVLAAVANDSREL
VYRDEAMAKVIKLAQQIAGSDASVMVTGESGTGKEVLARYVHTRSARAKRPFISINCAAI
PEHLLESELFGHEKGAFTGAIARRIGKFEEATGGTLLLDEISEMDVRLQSKLLRAIQERV
IDRVGGTKPVPVDIRIIATSNRNLVDAVREGTFREDLLFRLNVVNLKIPPLRERPLDILE
LAQHFVKKYAEANGVPARPISAEARRVLSANRWQGNVRELENTMHRAVLMAQGDEIGPDA
ILTPDGDRLDLAKTVPAVAHATMAAEQVTRALVGRTVADVERDLILETLKHCLGNRTHAA
NILGISIRTLRNKLNEYSDGGIPITPAGTPGEYPRMPMMGA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttctcatcgttggcacattgaagggccagctcaccaccgccaccaagatcgcg
atggacaacggcgccaccgtgacccatgccgaggatcacgatcaggcgatgcgcgtgctg
cgcggcggcaagggcgccgacctcctgctggtcgacgtcgccctcgacatccgcgacctc
gtgatgcggctcgaggccgagcacatccacgccccgatcgtcgcctgcggcatcaccaac
gacgcccgcgccgctgtcgccgcgatccacgccggcgccaaggaatacatcccgctgccg
ccggaccccgagctgatcgccgcggtgctggccgcggtcgccaacgattcccgcgagctg
gtctatcgcgacgaggcgatggccaaggtgatcaagctggcgcagcagatcgccggctcc
gacgcctcggtgatggtcaccggcgagtccggaacgggcaaggaagtgctggcccgctac
gtccacacccgctccgcccgcgccaagcgtcccttcatctcgatcaattgcgccgcgatc
cccgagcatctgctcgaatccgagctgttcggccacgagaagggtgccttcaccggcgcg
atcgcccgccgcatcggcaagttcgaggaagcgaccggcggcacgctgctgctcgacgaa
atctcggagatggacgtccgcctgcaatccaagctgctccgcgccatccaggagcgcgtg
atcgatcgcgtcggcggcaccaagcccgtccccgtcgacattcgcatcatcgcgacctcg
aaccgcaatctggtggacgccgtgcgcgaaggcacgttccgcgaggatttgctgttccgc
ctcaacgtcgtgaacttgaagatcccaccgctgcgcgagcggcccctcgacatcctcgag
ctggcccagcacttcgtgaagaaatacgccgaggccaacggcgtgccggcgcgcccgatc
tcggcggaagcgcgccgcgtgctctcggccaaccgctggcagggcaacgtccgcgagctc
gagaacacgatgcatcgcgcggtgctgatggcgcagggcgacgagatcggccccgacgcc
atcctgacgccggacggcgaccgcctcgacctcgccaagaccgtgccggccgtggcgcat
gccacgatggccgccgagcaggtgactcgggcgctggtcggccgcacggtcgccgatgtc
gagcgcgacctgatcctggaaacgctgaagcactgcctcggcaaccgcacccacgccgcc
aacatccttggcatctcgatccgcacgctgcgcaacaagctcaacgaatattccgacggc
ggcatcccgatcaccccggcgggaacgccgggcgagtatccgcgcatgccgatgatgggg
gcctga
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