KEGG   Bradyrhizobium symbiodeficiens: CIT39_27590
Entry
CIT39_27590       CDS       T06284                                 
Name
(GenBank) AMP-dependent synthetase/ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
bsym  Bradyrhizobium symbiodeficiens
Pathway
bsym00061  Fatty acid biosynthesis
bsym00071  Fatty acid degradation
bsym01100  Metabolic pathways
bsym01212  Fatty acid metabolism
bsym02024  Quorum sensing
bsym04146  Peroxisome
Module
bsym_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:bsym00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    CIT39_27590
   00071 Fatty acid degradation
    CIT39_27590
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    CIT39_27590
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CIT39_27590
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:bsym01004]
    CIT39_27590
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bsym04147]
    CIT39_27590
Enzymes [BR:bsym01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     CIT39_27590
Lipid biosynthesis proteins [BR:bsym01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   CIT39_27590
Exosome [BR:bsym04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   CIT39_27590
  Exosomal proteins of breast cancer cells
   CIT39_27590
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: AWM09835
LinkDB
Position
complement(6468281..6470119)
AA seq 612 aa
MARPAVLTVADTIAKSFLRAAETRGDRPAIREKKFGIWQPTSWGEWLEISKEIAYALRAI
GFMPGDVASIIANAVPEWVHADMGILCAGGVSSGIYPTDASSQVEYLVNDSRTKVIFAED
EEQLDKILACRARCASLQRIIVFDMEGLSGFSDDMVMSLDEFRALGRNHMVGREALWQEM
IDSRSAGDLAILVYTSGTTGPPKGAMHANRSVTHQMRHANDFIPAREDEDRLIFLPLCHV
AERIGGYYISVALGSVMNFAESPETVPDNLREVQPTIFLAVPRIWEKFYSAITIALKDAT
PLQQWVYRRAIAIGYRMVDYRIEGKQPPLSLRLASRIAYRLAFRNIRRMIGLDRCRTAFT
GAAPIAPELIRWYLALGIDIHEVYGQTENCGVATMMPTERVKLGSVGTAVPWGEVALSPD
GEILIKGDFLFMGYLNQPEKTAEAIDPRGWLRTGDVGTIDNEGFVRITDRMKDIIITSGG
KNVTPSEIENQLKFSPYISDAVVIGDKRPYLTCLVMIDQENVEKFAQDHDIPFTNYASLC
RATEIQGLIGREIEQVNGNFARVETIKKFYLIERQLTPEDEELTPTMKLKRGFVNKRYAA
EIEAMYRQRAVA
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggcccgaccggcggtgctgacggtcgctgatacgatcgcgaagagcttcttgcgcgct
gcggagacgcggggcgaccggccggccatccgcgagaagaaattcggcatctggcagccg
accagctggggcgagtggttggagatctcgaaggagatcgcctacgcgcttcgcgcgatc
ggcttcatgcccggcgacgtcgcctccatcatcgccaacgccgtgccggaatgggtccat
gccgacatgggcatcctgtgcgcgggcggcgtgtcctctggaatctatccgaccgacgcg
tcgtcccaggtcgaatatctcgtcaacgattcccgcacaaaagtgatcttcgccgaggac
gaggagcagctcgacaagatcctcgcctgccgcgcgcgctgcgcgagcctgcagaggatc
atcgtgttcgacatggagggcctcagcggcttttccgacgacatggtgatgtcgctcgac
gagtttcgcgcgctcggccgcaatcacatggtcggccgtgaggcgctgtggcaggagatg
atcgacagccgcagcgccggcgatcttgccatcctggtctatacctcaggcacgaccggc
ccgcccaagggcgcgatgcacgccaaccgcagcgtgacgcaccagatgcggcacgccaac
gacttcatccccgcgcgggaggacgaggaccgactgatcttcctgccgctctgccacgtc
gcggagcgcatcggcggctattacatctcggtcgcgctcggctcggtgatgaacttcgcc
gagagcccggagaccgtgccggacaatctgcgcgaggtacagccgactatcttcctcgcg
gtcccccgcatctgggaaaaattctactccgccatcaccatcgcgctgaaggatgcgacc
ccgctgcagcaatgggtctatcgccgcgccatcgccatcggctaccgcatggtcgattac
cggattgagggcaagcagccgccgctgtcgttgcgcctcgcaagccggatcgcctatcgg
ctcgcattccgcaacatccgccgcatgatcgggctcgatcgctgccgtaccgccttcacc
ggcgccgccccgatcgcaccggagctgatccgctggtatctcgcgctcggcatcgacatc
cacgaggtctacggccagaccgagaattgcggcgtcgccaccatgatgccgacggagagg
gtcaagctcggctcggtcggtaccgcggtgccctggggcgaagtcgcgctatcgcccgat
ggcgagatcctgatcaagggtgacttcctgttcatgggctatctgaaccagccggagaag
acggccgaagcgatcgatcctcgcggctggctgcgcaccggcgatgtcggcaccatcgac
aacgagggcttcgtccggatcaccgaccggatgaaggatatcatcatcacctccggcggc
aagaacgtgacgccgtccgagatcgagaaccagctcaaattctcgccttacatttccgat
gccgtcgtcatcggcgacaagcggccgtacctcacttgcctcgtgatgatcgaccaggag
aatgtcgagaagttcgcccaggaccacgacattcccttcaccaattacgcgagcctgtgc
cgggcgacggagattcagggcctgatcggccgcgagatcgagcaggtcaacggcaatttc
gcccgcgtcgagaccatcaagaaattctacctgatcgaacgccagctcacgccggaggac
gaggagctgacgccgaccatgaagctgaaacgcggcttcgtgaacaagcgttacgccgcc
gagatcgaggcgatgtatcgccagcgcgcggtggcgtga

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