KEGG   Bradyrhizobium symbiodeficiens: CIT39_27890
Entry
CIT39_27890       CDS       T06284                                 
Name
(GenBank) AMP-dependent synthetase/ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
bsym  Bradyrhizobium symbiodeficiens
Pathway
bsym00061  Fatty acid biosynthesis
bsym00071  Fatty acid degradation
bsym01100  Metabolic pathways
bsym01212  Fatty acid metabolism
bsym02024  Quorum sensing
bsym04146  Peroxisome
Module
bsym_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:bsym00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    CIT39_27890
   00071 Fatty acid degradation
    CIT39_27890
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    CIT39_27890
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CIT39_27890
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:bsym01004]
    CIT39_27890
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bsym04147]
    CIT39_27890
Enzymes [BR:bsym01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     CIT39_27890
Lipid biosynthesis proteins [BR:bsym01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   CIT39_27890
Exosome [BR:bsym04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   CIT39_27890
  Exosomal proteins of breast cancer cells
   CIT39_27890
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: AWM09892
LinkDB
Position
complement(6532361..6534187)
AA seq 608 aa
MPGPTSQPDGLAGIKTLPELLRWRIKATPAAEAYRHFDATAQRWVSQSWHEIDAEFELWR
RALAAEAFATGERVAILMPNGIAHIAMDQAALSRGLVPVPMHAVDNPDSIAYVLVDSGAL
LLFVDTLERWQAIVATGQPLDHLKRVVCADAGGLITPDGRIVGLDHWLAQTPGGTAPLPD
VAIQPDDLAAIVYTSGTTGRPKGVMLSHGNVVANVKAIAHRIAAEPGDVFLSFLPLSHTF
ERTGGYYYPIAAGACVAYARSVPQLSEDLKHVQPTVLVSVPRIYERIYALIMQHRASAGG
IERALLDLTIAVGGRRFDARQRHGVPSLLDRLAWPLLKRIVADKVLAQLGGRLRVAVSGG
APIAAPVIRLFLALGLDVLQGYGMTETSPVVSVNTIDDNDPHSVGHVLDGVEVKLGENDE
LLVRGPSVMVGYWHKPEETRRVKDADGWLHTGDQARIENGRITITGRIKDILVTSTGEKI
APVDLETAILADPLFEQALVVGEQRPFLTALVVLNAKAWVQEKERLAASGRQGGAEERTA
LLARIAAAVKAYPSYATPRAVWWTLDPWTIASGLLTPTLKNKRPALERRFAEEIEHVYAK
KPAAITPT
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgccggggccgacgagtcaaccggacggacttgccgggatcaagacactgccggagttg
ctgcgctggcgtatcaaggcgacgccggcggcggaggcctatcggcatttcgatgcgacc
gcgcagcgttgggtcagccaatcctggcacgagatcgatgcggaattcgagctgtggcgg
cgggcgctcgccgcggaggcgttcgcgaccggcgaacgcgtcgccatcctgatgccgaac
ggcattgcgcatatcgccatggaccaggcggcgctgtcgcgcggcctcgtgccggtaccg
atgcatgccgtcgacaaccccgacagcatcgcgtacgtcctggtcgattccggcgcgctg
ctcctgttcgtcgatacgctggagcgctggcaggcgatcgtggcgaccggccagccgctc
gaccatctcaaacgcgtcgtctgcgcggatgcgggcgggctgatcacgccggatgggcgc
atcgtcgggctcgaccactggctcgcacaaacacccggcgggaccgcgccgctgcccgac
gtcgcgatccagccggacgacctcgccgccatcgtctacacctcgggcacgaccgggcgg
ccgaagggcgtgatgctgtcgcacggcaacgtggtcgccaatgtgaaggcgatcgcgcat
cgcatcgccgccgaaccgggcgacgtcttcctgtccttcctgccgctttcgcacacgttc
gagcgcaccggcggctattactacccgatcgcggccggcgcctgcgtcgcctatgcccgc
tcggtgccgcaactctcggaggatctgaagcatgtgcagccgacggtgctggtctcggtg
ccgcggatctacgagcgcatctacgcgctgatcatgcagcaccgcgcatcagcgggaggc
atcgagcgcgcgctgctcgacctcaccatcgccgtcggcgggcggcgtttcgatgcgcgg
cagcggcatggcgtgccgtcgctgctggaccggctggcctggccgctgctgaagcggatc
gtcgccgacaaggtgctggcccagctcggcggccggctgcgtgtcgcggtctccggcggc
gcgccgattgcggcacccgtcattcgcctgtttctcgcgctcgggctcgacgtgcttcag
ggctacggcatgaccgagacctcgccggtggtctccgtcaacaccatcgacgacaatgat
ccgcattcggtcggccatgtcctcgacggcgtcgaggtcaagctgggcgagaacgacgaa
ttgctggtgcgcggccccagcgtgatggtcggctattggcacaagccggaggagacgcgc
cgcgtcaaggatgccgacggctggttgcataccggcgaccaggcccgcatcgagaacggg
cgcatcaccatcaccggccgcatcaaggatatcctggtgacgtcgaccggcgagaagatc
gcgccggtggatcttgagaccgcgatcctcgccgatcccctgttcgaacaggcgctggtg
gtcggcgagcagcggccgttcctcaccgcgctggtcgtgctgaatgcaaaagcctgggtg
caggagaaggaaaggctcgctgccagcggcaggcaaggcggcgcggaggaacggactgct
ctgctggcgagaatagcggcggccgtgaaggcctatccgtcctacgcgacgccgcgcgcg
gtgtggtggacgctggatccgtggaccatcgcgagcggcctgctcacgccgacgctgaag
aacaagcggcccgcgctcgagcgccgcttcgcggaggagatcgagcacgtctatgcgaag
aagcccgcggcgataacgccgacgtga

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