Bradyrhizobium symbiodeficiens: CIT39_28670
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Entry
CIT39_28670 CDS
T06284
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym03030
DNA replication
bsym03430
Mismatch repair
bsym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIT39_28670
03430 Mismatch repair
CIT39_28670
03440 Homologous recombination
CIT39_28670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsym03032
]
CIT39_28670
03400 DNA repair and recombination proteins [BR:
bsym03400
]
CIT39_28670
Enzymes [BR:
bsym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIT39_28670
DNA replication proteins [BR:
bsym03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CIT39_28670
DNA repair and recombination proteins [BR:
bsym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CIT39_28670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_30
AAA_16
AAA_5
AAA_14
AAA_18
AAA_19
TsaE
AAA_assoc_2
RCF1-5-like_lid
AAA_24
TraI_hel_assoc_N
TIP49
AAA_2
SRP54
nSTAND3
AAA_lid_RFC1
SKI
Rad17
Zeta_toxin
AAA_28
RNA_helicase
AAA_33
CbiA
Motif
Other DBs
NCBI-ProteinID:
AWM10023
LinkDB
All DBs
Position
complement(6669530..6671365)
Genome browser
AA seq
611 aa
AA seq
DB search
MTDAGAPPNPDSAGPAGNAPYRVLARKYRPSSFDDLIGQEAVVRTVSNAFETGRIPQAWI
LTGVRGVGKTTTARILARALNYEMPDGSVTGPTIHMPTLGVHCQAIMESRHMDVLEMDAA
SHTGVDDVRQINDSVRYAPASARYKVYIIDEVHMLSTAAFNAFLKTLEEPPEHAKFVFAT
TEIRKVPVTVLSRCQRFDLRRVEADVLMKHLANIAAKESVEIEPEALGIIARAAEGSVRD
SLSLLDQAIAHAAGTVKADAVRQMLGLADRTRVIDLFDSLARGDIAAAFKEFRDQYDVGA
DPIVVLSDLAEFVNFVTRVKIVPATADNIAYGETERVRAKDFASKISMRVLSRMWQMLLK
GITEVQAATRPAAAAEMVLVRIAYVADLPTPDEAIRMLEQNSGGSPVASGGGAGRSSASS
APVASASTVSAAPVRMPTSSPSAFGGGARPQMVAPAPDPQGAAPQLRITSFTQLVALAGQ
KRDIMTKSALEGDMRLVRFEEGRLEVALEPNASKSMISELARKFEQWTGRRWTIVVSNEQ
GQPTLRAVNQAAKQEHARTAEADPRVREVLSRFPGAKVVEVRRLAPETPEANINADYGSD
DPPDGSDGDDL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgctggcgcccctccaaatcccgacagcgccggcccggccggcaacgcgcct
taccgggtgctggcgcgcaaataccgtccttccagtttcgacgatctgatcggccaggag
gccgtggtccgcaccgtctccaatgccttcgaaaccggacggattccgcaggcctggatc
ctcaccggcgtccgcggcgtcggcaagaccaccaccgcgcgtatcctggcccgcgcactc
aactacgagatgccggatggctcggtgacgggcccgaccatccacatgccgacgctcggc
gtgcattgccaggcgatcatggaaagccggcacatggacgtgctggagatggacgcggcc
tcgcacacaggcgtcgacgacgtccgccagatcaatgacagcgtgcgctatgcgccggcc
agcgcgcgctacaaggtctacatcatcgacgaagtccacatgctgtcgacggcggcgttc
aacgccttcctgaagacgctggaggagccgccggagcacgccaaattcgtgttcgcgacg
accgagatccggaaagttccggtcacggtgctgtcgcgctgccagcgctttgatctccgc
cgcgtcgaggccgacgtgctgatgaagcacctcgccaatatcgcggcgaaggaaagcgtc
gaaatagagcccgaagcgctcggcatcatcgcgcgcgccgccgaaggctcggtgcgcgat
tcgctgtcgctgctcgaccaggccattgcccatgcggccggcaccgtgaaggccgatgcg
gtcaggcagatgctggggctcgccgaccgtacccgcgtcatcgacctgttcgattcgctg
gcgcgcggcgacatcgcggccgccttcaaggagttccgcgaccagtacgatgtcggcgcc
gatccgatcgtcgtgctctcggacctcgctgaattcgtcaatttcgtcacccgcgtgaag
atcgtgcccgcgactgccgacaacatcgcctatggcgagaccgagcgggtgcgcgcgaag
gattttgcctcgaagatctcgatgcgcgtgctgtcgcggatgtggcagatgctgctgaag
ggcatcaccgaggtacaggccgcaacgcggcccgcagcggcggccgagatggtgctggtg
cgcatcgcctatgtcgccgatttgccgacgccggacgaggcgatcaggatgctggagcag
aacagcggcggttcgccggtcgcgagcggcggcggtgccgggcgcagcagcgcgtcgtcc
gcgccggttgcatccgcatcgaccgtgtccgcagcgccggttcgcatgccgacatcatcg
ccatcagcgtttggcggtggcgcccggccgcagatggtggcgcccgcgccggatccgcaa
ggtgccgcgccgcagctgcgcatcacgagcttcacccagctcgtcgcgctggccgggcag
aagcgcgacatcatgaccaagagcgcgctcgaaggcgacatgcgcctcgtccgtttcgag
gagggccggctggaggtcgcgctcgagcccaacgcctccaagtcgatgatctcggagctt
gcgaggaagttcgagcagtggaccggccgtcgctggaccatcgtcgtgtccaacgagcag
ggccagccgacgctgcgcgcggtgaaccaggccgccaaacaggagcatgcgcggaccgcc
gaggccgatccgcgcgtgcgggaggtgctgtcgcgtttccccggcgcaaaggttgtcgag
gtccgcaggcttgccccggagacgccggaggccaatataaacgcggactatggcagcgac
gatccgcccgacggttccgacggcgacgatctctga
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