Bradyrhizobium symbiodeficiens: CIT39_30490
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Entry
CIT39_30490 CDS
T06284
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsym03016
]
CIT39_30490 (miaB)
Enzymes [BR:
bsym01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CIT39_30490 (miaB)
Transfer RNA biogenesis [BR:
bsym03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CIT39_30490 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AWM10340
LinkDB
All DBs
Position
38244..39638
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AA seq
464 aa
AA seq
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MTPPRKLHIKSYGCQMNVYDAQRMVDTLAPEGFVETASADDADLVILNTCHIREKASEKV
YSELGRLRVAKDEAARAGRTMQIAVAGCVAQAEGGEITRRAPVVDVVVGPQSYHHLPELL
KRARDEGRAIETEFPAQDKFGFLAQPKPDAIRARGISAFVTVQEGCDKFCTFCVVPYTRG
AEVSRPVAKIVDDVKRLADNGVRELTLIGQNVNAYHGDGPDGKTWPLGRLLEHLATIPGI
ARLRYSTSHPRDVDDSLIAAHRDLGALMPFVHLPVQSGSDRILAAMNRKHTADDYLDVID
RFRSARQDIAFSSDFIVGFPGESEQDFLATLALVTQIGYAAAYSFKYSARPGTPAADMQE
TVSPAEMDQRLERLQELIDSQQSAFNKAAIGSTVDVLFERPARKHGQIVGRTAFLQPAHV
MAPPDIIGQILPVRIDSLERYSFLGELVPPHGAREPALSQATGA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgccgcgcaagctgcacatcaaatcatatggctgccagatgaacgtctacgat
gcccagcgcatggtggatacgctggctccggaaggattcgtggagacggccagcgctgat
gacgccgaccttgtcatcctcaacacctgccatatccgcgagaaagcctcagaaaaggtc
tattccgagctcgggcgactgcgcgtcgccaaggacgaggccgcccgcgccgggcgcacg
atgcagatcgcggtcgcgggctgcgtcgcgcaggccgaaggtggggagatcacacgccgc
gcgcctgtggtcgacgtcgttgtcggcccgcagagctatcatcaccttcctgagcttttg
aagcgtgcgcgcgacgaaggccgcgcgatcgagaccgagtttcccgcccaggacaagttc
ggctttctcgcccaacccaagcccgacgccatccgcgcgcgcggcatttccgctttcgtc
acggtgcaggaaggttgcgacaagttctgcaccttctgcgtcgtgccttatacgcgcggc
gccgaagtgtcccggcccgtggcgaagatcgtcgacgacgtgaagcggctcgccgacaac
ggcgtgcgcgagctcacgctgatcgggcagaacgtcaacgcatatcatggcgacgggccg
gacggaaaaacctggccgctcggcaggctgctcgaacatctggcgacgattcccggcatc
gcgcggctgcgctactcgaccagccacccccgcgacgtcgacgacagtctgattgcggcc
catcgcgatctcggtgccctgatgccgttcgtgcacctgccggtgcagtcgggttcggac
cggattctggcggccatgaaccggaaacataccgccgatgattatctcgatgtcatcgac
cgtttccggtctgcgcgccaagacattgctttttcatcagatttcatcgtcggcttcccc
ggcgagagcgagcaagattttctcgccaccctcgcgcttgtcacgcaaatcggctacgct
gcggcttattcgttcaaatactccgcccggccgggaacgccggccgcggacatgcaggag
acggtgtcccccgccgaaatggaccagcgattggagcggctccaggaactgatcgacagc
cagcaatcggccttcaacaaggctgcgattggctcaacggtcgacgtgctgttcgagcgt
ccggcgcgcaagcacggccagatcgtcggccgcaccgcgttcctgcagcccgcccatgtg
atggccccgcccgacatcatcggacagatcctgcctgtcaggatcgacagcctcgaacgc
tacagtttcctcggcgagctcgtgcccccgcacggcgcgcgcgagcccgctttatcgcaa
gccactggagcctga
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