Bradyrhizobium symbiodeficiens: CIT39_30780
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Entry
CIT39_30780 CDS
T06284
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CIT39_30780 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bsym03011
]
CIT39_30780 (rpsA)
Ribosome [BR:
bsym03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CIT39_30780 (rpsA)
Bacteria
CIT39_30780 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
CvfB_2nd
RuvA_N
Motif
Other DBs
NCBI-ProteinID:
AWM10396
LinkDB
All DBs
Position
complement(106463..108169)
Genome browser
AA seq
568 aa
AA seq
DB search
MASTSADTYSPSRDDFAAMLDESFAGGNLQESSVIKGKVVAIEKDMAVIDVGLKTEGRVA
LREFSGPGRDSELKVGDEVEVFLDRIENALGEAVLSRDKARREESWGKLEKAFQNNEKVN
GVIFNQVKGGFTVDLDGAVAFLPRSQVDIRPIRDVAPLMNNSQPFQILKMDRRRGNIVVS
RRTVLEETRAEQRQELVQNLEEGQVIDGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVN
HPTEVLSIGQTVKVKIIKINHETHRISLGMKQLLDDPWQGIEAKYPLGARFTGRVTNITD
YGAFVELEPGIEGLIHVSEMSWTKKNMHPGKIVSTSQEVEVQVLEVDSVKRRISLGLKQT
MRNPWEVFVEGHPTGSTVEGEVKNKTEFGLFLGLEGDVDGMVHLSDLDWKLPGEQVIDNY
KKGDMVKAVVLDVDVEKERISLGIKQLEGDPFAEPGDVKKGAVVTCEVLEVKESGIEVKI
AGTDFTTFVKRSELARDRNDQRAERFAVGEKVDARVIQFDKKARKVQVSIKALEVAEEKE
AIAQYGSSDSGATLGDILGTALKNRDSK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgacttccgctgatacctatagcccgtcgcgcgacgatttcgccgcgatgctc
gatgagtccttcgcaggtggcaacctgcaggagagctccgtcatcaagggcaaggttgtt
gcaattgaaaaggacatggccgtcatcgacgtcggcctgaagaccgagggccgcgtcgcc
ctgcgcgaattttccggccccggccgtgacagcgaactgaaggtcggcgacgaggtcgaa
gtgttcctcgatcggatcgagaacgcgctcggcgaagccgtactgtcgcgcgacaaggcg
cgccgcgaagagagctggggcaagctcgagaaggcgttccagaacaacgaaaaggtcaac
ggcgtcatcttcaaccaggtcaagggcggcttcaccgtcgacctcgacggtgccgtggcc
ttcctgccgcgctcgcaggtcgacatccgtccgatccgcgacgttgcgccgctgatgaac
aactcacagccgttccagatcctcaagatggaccgccgccgcggcaatatcgtcgtgtcc
cgccgcacggttctcgaagagacccgcgccgagcagcgtcaggaactggtgcagaacctc
gaagagggtcaggtcatcgacggcgtggtcaagaacatcaccgattacggtgcgttcgtt
gatctcggcggcatcgacggcctgctgcacgtcaccgacatcgcgtggcgccgtgtcaac
cacccgaccgaggtgctctcgatcggccagaccgtgaaggtcaagatcatcaagatcaac
cacgagacgcaccgcatctcgctgggcatgaagcagctgctggacgatccgtggcagggc
atcgaagccaagtacccgctgggtgcccgcttcaccggccgcgtcaccaacatcaccgac
tacggtgcgttcgtcgagctcgagccgggcatcgaaggcctgatccacgtctccgagatg
tcgtggaccaagaagaacatgcaccccggcaagatcgtttcgacctcgcaggaagtcgaa
gtgcaggtgctggaagtcgattccgtcaagcgccgcatctcgctcggcctcaagcagacc
atgcgcaacccgtgggaggtcttcgtcgaaggtcacccgaccggttcgacggtcgagggc
gaggtcaagaacaagaccgagttcggtctgttcctgggtctcgaaggcgacgtcgacggc
atggtccatctctccgacctcgactggaagcttccgggcgagcaggtgatcgacaactac
aagaagggcgacatggtgaaggccgtggtgctcgatgtggacgtcgagaaggagcgcatc
tcgctcggcatcaagcagctcgaaggcgaccccttcgccgagccgggcgatgtcaagaag
ggcgcggtcgtgacctgcgaagtgctcgaagtgaaggaaagcggtatcgaggtgaagatc
gccgggaccgacttcaccaccttcgtcaagcgctcggagctcgcccgtgaccgcaacgac
cagcgcgccgaacgctttgccgtcggcgagaaggtcgatgcccgcgtgatccagttcgac
aagaaggcccgcaaggtccaggtgtcgatcaaggcgctcgaagttgccgaagagaaggaa
gccatcgcgcagtacggctcctccgattcgggagcaacgctcggcgacatcctcggcacc
gcgctcaagaaccgcgacagcaagtaa
DBGET
integrated database retrieval system
