Bradyrhizobium symbiodeficiens: CIT39_30885
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Entry
CIT39_30885 CDS
T06284
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsym03016
]
CIT39_30885
Enzymes [BR:
bsym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CIT39_30885
Transfer RNA biogenesis [BR:
bsym03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CIT39_30885
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AWM10415
UniProt:
A0A2U8QM29
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All DBs
Position
complement(125601..126215)
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AA seq
204 aa
AA seq
DB search
MTVRLHRGDLPDLSRYTGAVAIDTETMGLNPHRDRLCVVQLSPGDGSADVVQIPKGHTDA
PNLKALLANPAITKIFHFARFDVAVLYQTFGVMTGPIYCTKIASRLIRTYTDRHGLKDLV
REVLNVDLSKQQQSSDWGSDSLTEPQLAYAASDVLHLHALRERLDAMLVREGRTALAKAC
FDFLPTRALLDLQGWEEEDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacgcctgcatcgcggcgacctgcccgacctgtcccgctacaccggagcggtg
gcgatcgacaccgagaccatggggctgaacccgcaccgcgaccggctctgcgtggtgcag
ctctcgcccggcgacggcagcgccgacgtggtgcagatccccaaaggccacaccgacgcg
ccgaacctgaaggcccttctggccaatcccgccatcacaaaaatcttccacttcgcgcgg
ttcgacgtcgcggtgctgtaccagaccttcggcgtcatgaccggcccgatttattgcacc
aagattgcctcccgcctgatccgcacctacaccgaccgccacggcctgaaagacctggtg
cgcgaggtgctcaatgtcgatctctccaagcagcagcagtccagcgattggggttccgac
agcctgaccgagccgcagctcgcttatgccgcttccgacgtgctgcacctgcatgccctg
cgcgagcggctcgacgccatgctggtgcgtgagggccgcaccgcgctggccaaagcctgt
ttcgacttcctgcccacccgcgccctgctcgacctccagggctgggaggaggaggacatt
ttcgcgcactcctga
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