Bradyrhizobium symbiodeficiens: CIT39_31350
Help
Entry
CIT39_31350 CDS
T06284
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym03030
DNA replication
bsym03430
Mismatch repair
bsym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIT39_31350 (holA)
03430 Mismatch repair
CIT39_31350 (holA)
03440 Homologous recombination
CIT39_31350 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsym03032
]
CIT39_31350 (holA)
03400 DNA repair and recombination proteins [BR:
bsym03400
]
CIT39_31350 (holA)
Enzymes [BR:
bsym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIT39_31350 (holA)
DNA replication proteins [BR:
bsym03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CIT39_31350 (holA)
DNA repair and recombination proteins [BR:
bsym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CIT39_31350 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
FLAD1_M
Motif
Other DBs
NCBI-ProteinID:
AWM10498
LinkDB
All DBs
Position
complement(213960..214988)
Genome browser
AA seq
342 aa
AA seq
DB search
MVALRGKEIDAFLARPDAGRPIILLYGPDAGLVRERADALIASAVDDPNDPFSLVKLDGD
ELSAEPSRLVDEAMTVPLFGGRRAIRIRAGSRSFASGIDTLAEMNVRDCRIVIEAGELRP
ESPLRKACERAKAAVAIGCYPDTERDLAKLMEDELRIANLRIAQDARAALMSFLGGDRQA
SRNELRKLALYAHGKGEITLDDVMAVVADASELKLDPIVDGAFAGRPDIVETEFAKAMIA
GTYPGVIISAAQRQAAWLHKSALAIADGQPASAVLDGGYPRLHFSRKPAVETALRNFSVA
RLAAIIEQLASAALDTRKQSTLAAAIAQRTLMAIAANAKRRG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgctgcgtggaaaagagatcgacgccttcctcgcccgccccgatgcgggccgt
ccaatcatcctgctctacggtcccgatgccggcttggtgcgtgagcgcgcagacgcgctg
atcgcctctgccgtcgatgatcccaacgatccattctcgctggtcaagctcgacggcgac
gagctctccgccgagccctcgcgcctcgtcgacgaagccatgacggtgccgctgttcggc
ggccgccgcgccatccgcattcgcgcaggctcgcgcagctttgccagcggcatcgacacc
ctggccgaaatgaacgtgagggattgccgcatcgtgatcgaggccggcgagctgcgaccg
gaatcgccgctgcgcaaggcctgcgagcgcgccaaggcagccgttgcgatcggctgctat
cccgacaccgagcgcgaccttgccaagttgatggaagacgagctccgcatcgcaaatttg
cgcatcgcgcaggatgcccgcgcggcgctgatgtccttcctcggcggcgaccgccaggcc
tcgcgcaacgagctgcgcaagctggccctctatgcccatggcaagggcgagatcacgctg
gacgacgtgatggcggtggttgcggacgcgtccgagctcaagctcgacccgatcgtcgac
ggggcctttgccggccggcccgacattgtcgagaccgaattcgccaaggccatgatcgcc
ggcacttatcccggcgtcatcatctccgccgcgcagcgccaggctgcgtggctgcacaaa
tcggcgctcgcgatcgccgacggccagcctgcttccgccgtgctcgacggcggttatccg
cgcctgcatttctcacgcaagccagcggtcgaaacggcactgcgcaatttcagcgtggcg
cggctcgccgccatcatcgagcagctcgcgagcgcggcgctcgacacccgcaagcaatcg
acgctggccgcagccatcgcccagcgcactctaatggcgatcgccgcgaacgcgaagcgg
cggggatag
DBGET
integrated database retrieval system
