Bradyrhizobium symbiodeficiens: CIT39_31400
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Entry
CIT39_31400 CDS
T06284
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIT39_31400 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsym03400
]
CIT39_31400 (xth)
Enzymes [BR:
bsym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CIT39_31400 (xth)
DNA repair and recombination proteins [BR:
bsym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CIT39_31400 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AWM10507
LinkDB
All DBs
Position
complement(224864..225679)
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AA seq
271 aa
AA seq
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MRFSLTTWNINSVRLRIDLVAKFLKSARPDVLCLQETKCIDDAFPLKRFKRLGYEHVALN
GQKGYHGVAIVSKIPFESTDIRTFCDKVDSRHISVSFGEKANIARPLVVHNFYVPAGGDI
PDPALNEKFDHKLRFLDEMKACEPLHPRGEDRHILVGDLNVAPQENDVWSHKQLLKVVSH
TPVETEKLEAALAAGEWVDVARDRIPMSEKVYTWWSYRSADWTVGDRGRRLDHIWVSRAL
KDAVSDFTILRDARSWERPSDHVPVTVTLEV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttccctgacaacctggaacatcaattcggtgcggctgcgcatcgatctggtc
gcgaagtttctcaagagcgcgcggccggacgtgctgtgcctgcaggagaccaagtgcatc
gacgatgcgtttccactgaagcgcttcaagcggctcggctatgagcacgtagcactgaac
gggcagaagggctatcacggcgtcgccatcgtctcgaagattccattcgaatcgactgat
atccgcaccttctgcgacaaggtggattcgcgtcacatctcggtgtcgttcggcgagaag
gccaatatcgcaaggccgctggtggtgcataatttctacgtccccgccggcggcgatatt
cccgatcccgcgctgaacgagaagttcgatcacaagctccgtttcctcgacgagatgaag
gcgtgcgagccgctgcatccgcgcggcgaggatcgccacatcctggtcggcgatctcaac
gtcgccccgcaggagaacgacgtgtggtcgcacaagcagcttctgaaggtggtctcgcat
acgccggtcgaaaccgaaaagctggaggccgcactggccgcgggcgaatgggtcgacgtc
gcacgcgaccggattccgatgtcggaaaaagtctacacgtggtggagctaccgctccgcc
gactggaccgtcggcgaccgcggccgcaggctcgaccacatctgggtctcgcgcgcgctg
aaagacgcggtcagcgatttcacgatcctgcgcgacgcgcggagctgggagcggccgtcg
gaccatgtcccggtgacggtgacgctggaggtgtga
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