Bradyrhizobium symbiodeficiens: CIT39_31600
Help
Entry
CIT39_31600 CDS
T06284
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsym03032
]
CIT39_31600
03400 DNA repair and recombination proteins [BR:
bsym03400
]
CIT39_31600
Enzymes [BR:
bsym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CIT39_31600
DNA replication proteins [BR:
bsym03032
]
Prokaryotic type
DNA Topoisomerases
CIT39_31600
DNA repair and recombination proteins [BR:
bsym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CIT39_31600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AWM10543
LinkDB
All DBs
Position
266358..267527
Genome browser
AA seq
389 aa
AA seq
DB search
MMDQQNLGTIRPASADPAAIALAKALGQWPKPAPFKRPSPKKAFDTAPAATVEALAKELG
LRLGDQNELTIRRIKRGKGYSFVRPNGAHIRDARTIRRLHAMAVPPAYREVRYSADPSLH
LQAVGRDAAGRLQYRYHADWEKVREHRKAHRLEKLVGALPKIRRKVSAFLSGDEPTREFA
LSAVIELIARTAIRPGNESYARLNGTRGATTMLKSNVTLEDDSFVLTFKAKGGKAVRKEC
DAAKLVRAIGILRDVPGKRMFQYRDAYGIVRAVSTTQVNAFLREIAGIKISLKDFRTLMA
SAVVVESLSRITPATSQRGRKKQVLDAIRAAADKLSNTPAICRKSYVHDTIVTAFEDGIL
ERFAATMKGQRSQARREQLLQQVVATAAV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagcagaatctcgggacgatacggcccgcttcagccgatcctgccgccatt
gcgctggccaaagccctcggacaatggccgaaaccggcccctttcaagcgtccgagcccg
aaaaaggccttcgacacggcgcccgcggcgacggtcgaggcgctcgccaaggagctcggc
ctgcggctcggggaccagaacgagctgaccatccgccgcatcaagcgcggcaaaggctat
tccttcgtccgccccaacggcgcacatattcgcgacgcccgcaccatccgccggctgcac
gccatggcggtgccgccggcctatcgcgaggtgcgttactcggccgatccgagcttgcat
ctccaggccgtgggacgcgatgccgcgggccggctgcaatatcgctatcatgccgattgg
gagaaggtccgcgagcaccgcaaggcgcatcgcctggaaaagctcgtcggcgcgctgcca
aagatccggcgcaaggtctcggcgttcctgtcgggcgacgaaccgacgcgtgaattcgcg
ctctcggccgtgatcgagctgatcgcgcgcaccgcgatccgccccggcaatgaatcctac
gcccgtctcaacggcacgcgtggcgcgaccacgatgctgaagtccaacgtcacgctggaa
gacgacagcttcgtgctgaccttcaaggcgaagggcggcaaggcggtgcggaaagaatgc
gacgctgccaagctggtgcgcgctatcggtattctccgcgacgttccgggcaagcgcatg
ttccagtatcgcgatgcctacggcatcgtgcgggcggtcagcaccacgcaggtcaacgcg
tttctacgcgagatcgccggcatcaagatttcgctgaaggatttccgcacgctgatggcc
tcggccgtcgtcgtcgaatcgctgtcgcggatcacaccggcgaccagccagcgcggccgc
aagaagcaggtgctggacgcaatccgtgccgccgccgacaagctttccaatacgccggca
atctgccgcaaaagctacgtccacgacaccatcgtcaccgctttcgaggatggcatcctc
gagcgcttcgccgcgaccatgaagggccagcgctcgcaggcgcggcgcgagcagctcttg
cagcaggttgtcgcgaccgccgcggtgtag
DBGET
integrated database retrieval system
