Bradyrhizobium symbiodeficiens: CIT39_32185
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Entry
CIT39_32185 CDS
T06284
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsym03016
]
CIT39_32185 (thpR)
Enzymes [BR:
bsym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CIT39_32185 (thpR)
Transfer RNA biogenesis [BR:
bsym03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CIT39_32185 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
AWM11403
UniProt:
A0A2U8QMR1
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All DBs
Position
379681..380217
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AA seq
178 aa
AA seq
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MPRLFTGLEIPAEVSQTLSHLRGGLPGARWIDPENYHVTLRFIGDIDGMSANEIASMLFR
VDRKPFEVKVQGLQSFGGRKPRAVVATIAPSRPLMELQAELERLMQRIGLDPEGRKFIPH
VTLARLHDATDRDVADYLSMRGYFPSKAFTAERFVLFSSRASTGGGPYVVEDAYELCE
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtttgttcactggtctggaaatcccggctgaagtcagccagacgctttcccat
ttgcggggtggccttcccggcgcccgctggatcgatcccgaaaattatcacgtcaccctg
cggttcatcggcgatatcgacggcatgtccgccaacgagatcgcctcgatgctgtttcgc
gtcgatcgcaagccgttcgaggtgaaggtgcagggcttgcagagctttggcggacgcaag
ccgcgcgctgtggtcgcgaccatcgcgccgagcaggccgctgatggaattgcaggccgag
ctcgaacgcttgatgcagcggatcggtctcgatcccgagggacgcaagttcatcccgcat
gtcacgctcgcccggctgcacgacgccactgatcgcgacgtcgccgactatctctcgatg
cgcggctacttccccagcaaggcattcacggccgaacgttttgtgctgttctcgtcgcgt
gcatcgaccggcggcggcccgtacgtggtcgaggacgcctacgagctgtgtgagtga
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