Bos taurus (cow): 100124428
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Entry
100124428 CDS
T01008
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
bta
Bos taurus (cow)
Pathway
bta03013
Nucleocytoplasmic transport
bta03015
mRNA surveillance pathway
bta03040
Spliceosome
bta05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100124428 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
100124428 (NCBP1)
03015 mRNA surveillance pathway
100124428 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100124428 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
100124428 (NCBP1)
03041 Spliceosome [BR:
bta03041
]
100124428 (NCBP1)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
100124428 (NCBP1)
Spliceosome [BR:
bta03041
]
Common components
Common spliceosomal components
Cap binding complex
100124428 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF1690
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
100124428
NCBI-ProteinID:
XP_003586450
BGD-bta:
BT25811
Ensembl:
ENSBTAG00000009732
VGNC:
31907
UniProt:
E1BMM0
LinkDB
All DBs
Position
8
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKSNN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFASTENYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDFVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgagaacgatgggggacaacctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcacttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggtgttttggaagctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagttgaccatttatacaacattagttggactactgaatgccaggaattacaacttt
ggtggagaatttgtagaagccatgattcgccaactgaaagaatcattgaaatcaaacaat
tataatgaagctgtatatttggtccgttttctatctgatcttgtgaattgtcatgtcatt
gctgccccatcaatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtgcctcaggtgcggcgggattggtacgtgtacgcgtttctgtcgtccttgccctgggtt
ggaaaggaattgtatgaaaagaaagatgcagagatggaccgaatctttgccagcactgaa
aactatcttaaaagacgccaaaagactcatgtgcccatgttacaagtatggactgcagag
aaaccacatccgcaagaagagtatttagattgcctctgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagccctgcagcacaacctgcctccattcacaccgccgcctcacactgaagactcg
gtgtacccgatgccgagggtcatcttcagaatgtttgattacacagatgatcctgagggt
cctgtaatgccagggagtcattcagtggaaagatttgtaatagaagagaatcttcactgc
atcattaagtcccattggaaggaaaggaagacttgtgctgcacagctagtgagttatcct
gggaagaacaagatccccttgaattaccacatagttgaggtgatctttgcagagctgttt
caacttccggcaccgcctcatatcgatgtgatgtacacgacacttctcattgaactgtgc
aaacttcagcctggctctctaccccaagttcttgcacaggcaactgaaatgttatatatg
cgtttggacacaatgaatactacatgtgtagacaggtttattaattggttttcccatcat
ctaagtaacttccaattccgttggagctgggaagattggtcagattgtcttactcaagat
ccagaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagattttgtccctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaaatatggagatgaaagtagcaactctcttcctggacattcagtt
gccctctgtttagctgttgcctttaaaagtaaagcaaccaatgatgaaatcttcagcatt
ctgaaagacgtccctaatcctaatcaggatgatgatgatgatgaaggattcagctttaac
ccactgaaaatagaagtctttgtacagactctgctacacttagcagccaagtcattcagc
cactccttcagtgctcttgcgaagtttcatgaagtcttcaaaaccctagctgaaagtgat
gaaggaaaattacatgttctaagagtcatgtttgaggtctggcggaaccatccacagatg
attgctgtactagtagataagatgattcgtacacagattgttgactgtgctgcagtagca
aattggatcttctcttcagaattatctcgtgactttactagattgtttgtttgggaaatc
ttgcactccacaattcgcaagatgaacaaacacgttctgaagatccagaaagagctagaa
gaggctaaagaaaaactcgcaagacaacacaaacggcgaagtgatgatgatgacagaagc
agtgacaggaaagatggggctcttgaagaacaaatagaaagactgcaggaaaaagtggaa
tctgctcagagtgaacaaaagaatctcttccttgtcatatttcagcgttttatcatgatc
ctgactgagcacttagtacgctgtgaaactgatgggaccagtgtgttaacaccatggtat
aagaactgtatagagaggctccaacagatcttcctacagcatcaccaaataatccagcag
tacatggtgaccctggagaacctgctcttcactgctgaattagaccctcacatcctggct
gtgttccagcagttctgtgccctgcaggcctaa
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