Bos taurus (cow): 100125238
Help
Entry
100125238 CDS
T01008
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bta
Bos taurus (cow)
Pathway
bta03022
Basal transcription factors
bta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100125238 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
100125238 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bta03021
]
100125238 (ERCC2)
03036 Chromosome and associated proteins [BR:
bta03036
]
100125238 (ERCC2)
03400 DNA repair and recombination proteins [BR:
bta03400
]
100125238 (ERCC2)
Enzymes [BR:
bta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100125238 (ERCC2)
Transcription machinery [BR:
bta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100125238 (ERCC2)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100125238 (ERCC2)
DNA repair and recombination proteins [BR:
bta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100125238 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
100125238
NCBI-ProteinID:
NP_001096787
Ensembl:
ENSBTAG00000002072
VGNC:
28569
UniProt:
A6QLJ0
LinkDB
All DBs
Position
18:complement(52982421..52998639)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQYQRDSSLPHCRFYEEFDVHGRQVPLPTGIYNLDDL
KAVGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQANLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARE
TDAHLANPVLPDEVLKEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLYTLEISDLTDFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLESEETLRRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtctacttcccctacgactacatctacccggag
cagttctcgtacatgctggagctcaaacgcacgctggatgccaagggtcatggagtcctg
gagatgccctcaggcactgggaagacagtgtccctgttggccctgatcatggcgtaccag
cgggcgtatcccctggaggtgactaaactcatctactgctcgaggactgtgcctgagatt
gaaaaggtgattgaagaacttcgaaagttactcagcttctatgagaaacaggagggcgag
aagctgccatttttggggctggctctgagctcccggaagaacctgtgtattcatcccgag
gtgacgcccctgcgctttgggaaggacgtggacgggaaatgccacagcctcacggcatcg
tacgtgcgggcacagtaccagcgggactccagcctgccccactgccgcttctacgaggaa
tttgatgtccacgggcgccaggtgcccctccccacgggcatctacaacctagatgacctg
aaggctgtgggacggcgccagggctggtgcccgtacttcctggcccgatactcaatcctg
cacgccaacgtggtggtctacagctaccactacctgctggaccccaagattgctgacctg
gtgtccaaggagctggcccgcaaggccgtggtcgtctttgatgaggcccacaacatcgac
aacgtctgcatcgactccatgagcgtcaacctcacccgccgcaccctggatcggtgccag
gccaacctggagaccctgcagaagacggtgctcagaatcaaggagacggacgagcagcga
ctgcgagaggagtaccgccgcctggtggaggggctgcgggaggccagcgctgcccgggag
accgatgcccacctggccaaccccgtgctgcctgacgaagtgctaaaggaggcggtgcct
ggctccatccgcacggccgagcacttcctgggcttcctgcgccgcctgttggagtacgtc
aagtggcgcctgcgggtgcagcatgtggtccaggagagcccgcccgccttcctcagtggc
ctggcccagcgcgtctgcatccagcgcaagcccctcaggttctgcgccgagcgcctccgc
tccctcctgtacaccttggagatctcggacctcactgacttctccccactcaccctcctc
gctaacttcgccacgctcgtcagcacctatgccaagggtttcaccatcatcatcgagccg
ttcgatgacaggaccccgaccattgccaaccccatcctgcacttcagctgcatggacgcc
tcactggccatcaaacctgtgtttgagcgcttccagtccgtcatcatcacatctgggaca
ctgtccccactggacatctaccccaagatcctggacttccaccctgtcaccatggcaacc
ttcaccatgacgttggcccgggtctgcctctgccccatgatcatcggccgtggcaatgac
caggtggccatcagctccaagtttgagacccgggaagatattgcggtgatccggaactat
ggaaatctcctgctggagatgtctgccgtggtccctgacggcatcgtggccttcttcacc
agctaccaatacatggagagcactgtggcctcctggtacgagcagggcatcctggagaac
atccagaggaacaagctgctcttcatcgagacccaggatggggctgagaccagcgtcgcc
ctagagaagtaccaggaggcctgcgagaacggccgcggggccatcctgctctcggtggcc
cgaggcaaggtgtccgagggaatcgactttgtgcaccactacgggcgggccgtcatcatg
ttcggggtgccctacgtgtacacccagagccgcattctcaaggcacggctggaatacctt
cgggaccagttccagattcgtgagaatgactttctcacctttgatgccatgcgccatgct
gcccagtgtgtgggtcgggccatcaggggcaagacggactatggcctgatggtctttgcc
gacaagcggtttgctcgggctgacaagcgggggaagctaccccggtggatccaggagcac
ctcacggacgccaacctcaacctgaccgtcgacgagggggtccaagtcgccaagtacttc
ctgaggcagatggcacagcccttccaccgggaggaccagctgggcctgtccctgctcagc
ctggagcagctggagtcagaggagacgctgcggaggatcgagcagattgcccagcagcta
tag
DBGET
integrated database retrieval system
