Bos taurus (cow): 100138550
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Entry
100138550 CDS
T01008
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bta
Bos taurus (cow)
Pathway
bta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100138550 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
100138550 (FIP1L1)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100138550 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
100138550
NCBI-ProteinID:
NP_001193619
BGD-bta:
BT13284
Ensembl:
ENSBTAG00000020653
VGNC:
53714
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Position
6:68940881..69005837
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AA seq
530 aa
AA seq
DB search
MSAGEVERLVSELSGGTGGDEEEEWLYGDENEVERPEEENASANPPSGIEDETPENGVPK
PKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLNIKTGGRVYGTAVGT
KVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKR
IRMGLEVIPVTSTTNKITVQQGRTGNAEKETVLPSTKAEFTSPPSLFKTGLPPSRRLPGA
IDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFFPPGAPPTHLPPPP
FLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAF
PYGNVAFPHLPGSTPSWPSLVDTSKQWDYYSRREKDRDRDRDRDRERDRDRDRERERTRE
RERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETRHKSS
RSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEATPAE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctttatggcgatgaaaatgaagttgaaaggccagaagaagaaaat
gccagtgccaatcctccatctggaattgaagacgaaactcctgaaaatggcgtacctaaa
ccgaaagtgactgagactgaagacgatagtgatagcgacagtgatgatgatgaggacgat
gttcacgtcactataggagacattaaaacgggagcaccacagtatgggagttacggtaca
gcacctgtaaatcttaacatcaagacaggaggaagagtttatggaactgctgtaggaacg
aaagtcaaaggagtagatcttgatgcacctggaagcattaatggagttccactcttggag
gtagatttggattcttttgaagataaaccatggcgtaaacctggtgctgatctttctgat
tattttaattacgggtttaatgaagacacctggaaggcttactgtgaaaaacagaagagg
atacgaatggggcttgaagttataccagttacctctactacaaataaaattacggtacag
cagggaagaactggaaatgcagagaaggaaacagtgcttccatctacaaaagcggagttt
acttctcctccttctttgttcaagactggactcccaccaagcaggagattacctggggca
attgatgttattggtcagactataactatcagccgagtagaaggaaggcgacgggcaaat
gaaaacagcaatatacaggtcctttctgaaagatctgctactgaagtagacaacaatttt
agcaaaccacctccatttttccctccaggagctcctccaactcaccttccacctcctcca
tttcttccacctcctccaactgtcagcactgctccacctctgattccaccaccaggtatt
ccaataactgtaccacctccaggttttcctcctccaccaggtgctccacctccatctctt
ataccaacaatagaaagtggacattcctctggttatgatagtcgttctgcacgtgctttt
ccatatggcaatgttgcctttccccaccttcccggttctactccttcatggcctagtctt
gtggacaccagcaagcaatgggactattactcaagaagagagaaagaccgagatagagac
agagacagagaccgagagcgagatcgtgatcgagacagagaaagagaacgcaccagagag
agggaaagggagcgtgatcacagtcccacaccgagcgtcttcaacagtgatgaagaacga
tacagatacagggagtatgcagaaagaggctatgagcgccacagagcaagtcgggagaaa
gaagaacgacacagagaaagacgacacagagagaaagaggaaaccagacacaagtcctct
cgaagcaatagtagacgtcgccatgaaagtgaagaaggagacagtcataggagacacaag
cacaaaaaatctaaaagaagcaaagaaggaaaagaagctggcagtgagcctgcccctgaa
caggagagcaccgaagctacacctgcagaatag
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