Bos taurus (cow): 100190914
Help
Entry
100190914 CDS
T01008
Symbol
PRDM9
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
bta
Bos taurus (cow)
Pathway
bta00310
Lysine degradation
bta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100190914 (PRDM9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
100190914 (PRDM9)
03036 Chromosome and associated proteins [BR:
bta03036
]
100190914 (PRDM9)
Enzymes [BR:
bta01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
100190914 (PRDM9)
Transcription factors [BR:
bta03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100190914 (PRDM9)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
100190914 (PRDM9)
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100190914 (PRDM9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_15
zf-C2H2_4
SSXRD
zf-C2H2_5
zf-C2H2_ZN142
zf-C2H2_6
C2CH-4th_BIRD-IDD
Zn_ribbon_SprT
KRAB
SET
zf-C2H2_jaz
Phage_F
DUF7565
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
100190914
NCBI-ProteinID:
NP_001306826
Ensembl:
ENSBTAG00000004538
UniProt:
X5EMD8
LinkDB
All DBs
Position
1:complement(157545666..157559397)
Genome browser
AA seq
725 aa
AA seq
DB search
MAMRPNTSPEESTERDAGRTEWKPTAKDAFKDISVYFSKEEWEEMGEWEKIRYRNVKRNY
EALIAIGFRATRPAFMHHRRQVIKLQADDTEDSDEEWTPRQQGKLSSMAFRVEHNKHQNT
MSRAPLSKEFSLKELPGAAKLLKTSGSKQAQKLVPPPGKARTPGQHPRQKVELRRKETEV
KRYSLRERKGHVYQEVSEPQDDDYLYCEECQSFFIDSCAAHGPPIFVKDCAVEKGHANRS
ALTLPPGLSIRESSIPEAGLGVWNEVSDLPLGLHFGPYEGQITDDEEAANSGYSWLITKR
RNCYEYVDGKDTSLANWMRYVNCARDDEEQNLVALQYHGQIFYRTCQVVRPGCELLVWYG
DEYGQDLGIKRESSRKSELAGPRESKPKIHPCASCSLAFSSQKFLSQHVQHNHPSQTLLR
PSARDYLQPEDPCPGSQNQQQRYSDPHSPSDKPEGREVKDRPQPLLKSIRLKRISRASSY
SPRGQMGASGVHERITEEPSTSQKPNPEDTGKLFMGAGVSGIIKVKYGECGQGSKDRSSL
ITNQRTHTGEKPYVCGECGQSFNQKSTLITHQRTHTGEKPYVCGECGRSFNQKSTLITHQ
RTHTGEKPYVCGECGRSFSQKSTLIKHQRTHTGEKPYVCGECGQSFNQKSTLITHQRTHT
GEKPYVCGECGQSFNQKSTLITHQRTHTGEKPYVCGECGRSFSRKSTLITHQRTHRGEAL
CLQGV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggccatgaggccgaacacatctccagaggagagcactgagagagatgctgggagaaca
gagtggaagcccacggccaaagatgctttcaaagacatctctgtatacttctccaaggaa
gaatgggaagagatgggagaatgggaaaaaattcgatataggaatgtgaaaaggaactac
gaagcgctgattgctataggtttcagagccactcgaccagcattcatgcatcaccgcagg
caggtcatcaaactccaggcagatgacactgaggattctgatgaagaatggacaccaagg
cagcaaggtaaactttcttcgatggccttcagagtggagcacaataaacaccagaataca
atgtccagagcaccattaagtaaggaatttagtttgaaggaattgccgggagcagccaaa
ttgctgaagacaagtggctccaagcaggctcagaaactggtgccccctcccggaaaagca
aggactcctggacagcaccccagacaaaaagtcgaactcagaagaaaggagactgaagtg
aagaggtacagtctacgagaaagaaaggggcatgtgtaccaagaggtcagcgagccccag
gatgatgactacctctattgtgaggagtgtcagagcttcttcatcgacagctgtgctgcc
catgggcccccaatctttgtaaaggactgtgcagtggaaaaggggcatgccaaccgctca
gccctcactctgccccctgggttaagtatcagagagtcaagcatccctgaggctgggctt
ggagtgtggaacgaggtgtctgatctgccgctgggcctgcactttggcccctatgagggc
cagatcacagacgatgaagaggccgccaacagtggatactcctggctgatcaccaaaagg
agaaactgctatgagtatgtggatggaaaggacacgtctttggccaactggatgaggtat
gtgaactgtgcccgggacgatgaggagcagaacctggtggccttgcagtatcatgggcag
atcttctaccgaacctgtcaggtggtcaggccgggctgtgagctgctggtctggtacggg
gacgagtatggccaggacctcggcatcaagcgggaaagcagcaggaaaagcgagctcgcg
ggccccagagaatcgaagcccaagatccacccatgtgcctcctgctctctggccttctcc
agtcagaagttcctcagccaacatgtccaacacaatcacccctctcagaccctcctgaga
ccatctgcaagagactacctgcaaccagaggatccctgcccaggcagtcaaaatcagcag
cagcgatattccgatccacacagcccaagtgacaaacctgagggtcgtgaggtcaaggac
aggccccaacctttgctgaaaagcataaggctgaagaggatttcaagggcctcctcctac
tcacccagaggacaaatgggggcttctggggtgcatgagagaatcacagaagagcccagc
acaagccagaaaccgaatccagaggacacaggcaaattattcatgggggcaggggtctca
gggattataaaagtcaagtacggagagtgtgggcaaggatccaaggataggtcaagtctc
atcacaaaccagaggacacacacaggggagaagccctatgtttgcggggagtgtgggcaa
agcttcaatcagaagtccactctcatcacacaccagaggacacacacaggggagaagccc
tatgtttgcggggagtgtgggcgaagcttcaatcagaagtccactctcatcacacaccag
aggacacacacaggggagaagccctatgtttgcggggagtgtgggcgaagcttcagtcag
aagtccactctcatcaaacaccagaggacacacacaggggagaagccctatgtttgcggg
gagtgtgggcaaagcttcaatcagaagtccactctcatcacacaccagaggacacacaca
ggggagaagccctatgtttgcggggagtgtgggcaaagcttcaatcagaagtccactctc
atcacacaccagaggacacacacaggggagaagccctatgtttgcggggagtgtgggcga
agcttcagtcggaagtccactctcatcacacaccagaggacacacagaggagaagcctta
tgtttgcagggagtgtga
DBGET
integrated database retrieval system
