KEGG   Bos taurus (cow): 100296627
Entry
100296627         CDS       T01008                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
bta  Bos taurus (cow)
Pathway
bta02010  ABC transporters
bta04976  Bile secretion
bta05206  MicroRNAs in cancer
bta05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:bta00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    100296627
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    100296627
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    100296627
  09162 Cancer: specific types
   05226 Gastric cancer
    100296627
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:bta02000]
    100296627
   04147 Exosome [BR:bta04147]
    100296627
   04090 CD molecules [BR:bta04090]
    100296627
Enzymes [BR:bta01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     100296627
Transporters [BR:bta02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    100296627
Exosome [BR:bta04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100296627
CD molecules [BR:bta04090]
 Proteins
  100296627
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_16 Zeta_toxin Rad17 AAA RsgA_GTPase AAA_14 AAA_22 NEMP AAA_5 DUF2207_C G-alpha APS_kinase AAA_29 AAA_7 DUF815 NTPase_1
Other DBs
NCBI-GeneID: 100296627
NCBI-ProteinID: XP_024846787
Ensembl: ENSBTAG00000015666
LinkDB
Position
4:complement(32436349..32507387)
AA seq 1168 aa
MTTYAYYYSGIGAGVLIAAYIQVSFWCLAAGRQVHRIRKQFFHAIMQQEIGWFDVHDGEL
NTRLTNDISKINEGIGDKIGMFFQAMATFFTGFIIGFTEGWKLTLVILAISPVLGLSAAV
WAKILSSFTDKELLAYAKAGAVAEEVLAAIRTVTAFGGQKKELERYNKNLEEAKRIGIKK
AITANISMGAAFLLIYASYALAFWYGTSLVLSGEYSIGQVLTVFFSVLIGAFSVGQASPN
IEAFANARGAAYEVFKIIDHKPSIDSYSNTGHKPDNIKGNLEFRNVHFHYPSRNEVKILK
GLNLKVGSGQTVALVGNSGCGKSTTVQLMQRLYDPTEGMVSIDGQDIRTINVRYLREIIG
VVSQEPVLFATTIAENIRYGREDVTMDEIQKAVKEANAYDFIMKLPNKFDTLVGERGAQL
SGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGQTTIVIAHHLST
VRNADVIAGLDDGVIVEEGNHNELMGKRGIYFKLVTMQTKGNELELENTPXSKTDDLYTS
SQDSGSRSSLIRRKSTHRSIIGSQSQDRKLSTEETWDESVPPVSFWRILKLNITEWPYFV
VGVCCAIINGALQPGFSVILSRIIGIFTRDEDDETKRQNSNLFSLLFLILGIISFITFFL
QGFTFGKAGEILTRRLRYLVFRSMLRQDVSWFNDPKNTTGALTTRLASDAAQVKGAIGSR
LAVITQNIANLGTGIIISLIYGWQLTLLLLAIVPILEVTGVLEMKMLSGQALKDKKELEG
AGKIATEAIENFRTVVSLTWEERFEYIYAQSLQVPYRNSLRKAHVFGITFAFTQAMMYFS
YAGCFQFGAYLVAQGIMEFQDVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSAAHVINII
EKIPLIDSYSTEGLKPSTVEGNVAFNDVVFNYPTRPDIPVLRGLSLEVKKGQTLALVGNS
CCGKGTVIQLLERFCDPLAGTVLIDGKEIKQLNVQWLRAHMGIVSQEPILFDCSIGENIA
YGDNSRVVSQEEIERAAKEANIHPFIEMLPDKYNTRVGDKGTQLSGGQKQRIAIARALVR
QPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRIK
EHGTHQQLLAQKGIYFTMVSVQAGTKRQ
NT seq 3507 nt   +upstreamnt  +downstreamnt
atgaccacgtacgcctactattactctggaattggtgctggcgtgcttattgccgcttac
atccaggtctcgttctggtgtctggccgctggaagacaagtacacagaatcagaaaacag
ttttttcatgccatcatgcaacaggagataggctggtttgacgtgcatgacggagaactt
aacacccgcctcacaaatgacatctccaaaattaatgaaggaattggtgacaaaatcgga
atgttctttcaggcaatggcaacattcttcaccggttttataataggatttacagaaggt
tggaagctcacccttgtgattctggccatcagtcctgttcttggcctgtcagctgctgtc
tgggcaaagatactgtcttcatttactgataaagaacttttggcatatgcaaaagctgga
gcagtagctgaagaggtcttagcagctattagaactgtgactgcatttggaggacaaaag
aaagaacttgaaaggtacaacaaaaatttggaagaagccaagagaattggaataaagaaa
gctatcacggccaacatctctatgggtgctgcttttctattgatctatgcgtcctacgcc
ctggcattctggtacgggacctccttggtcctctcaggagaatattccattggacaagta
ctcacggtcttcttttctgtattaattggagcttttagtgttggacaggcatctccaaac
attgaggcatttgcaaacgcaagaggagcagcttatgaagtcttcaagatcattgatcac
aaaccaagcatcgacagctattcaaacactgggcacaaacccgacaatattaaaggaaat
ctggaattcagaaatgttcacttccattatccatctcgaaacgaagttaagatcttgaag
ggcctcaacttgaaggtagggagtgggcagacggtggccctggtcgggaacagcggctgt
gggaagagcaccaccgtccagctgatgcagaggctgtatgaccctacggagggcatggtc
agtatcgacggacaggatatcaggaccatcaacgtaaggtatctgcgggagattatcggg
gtggtgagtcaggagccggtgctgtttgccaccacgatagctgagaacattcgctatggc
cgtgaagatgtcaccatggatgagattcagaaagctgtgaaggaagccaacgcctatgac
tttatcatgaaactgcctaataaatttgacaccctggttggagagagaggagcccagcta
agcggtggacagaagcagagaatcgccatcgcccgggccctggttcgcaaccccaagatc
ctcctgctggacgaggccacctcagcgctggacacggagagtgaagcggtggttcaggcg
gccctggataaggccagagaaggccagaccaccattgtgatagcgcatcatctgtccaca
gttcgtaatgctgatgtcatcgctggtcttgatgatggagtcattgtggaggaaggcaat
cacaatgagctcatggggaagagaggcatttacttcaaacttgtcacaatgcaaacaaaa
ggaaatgaacttgaattagaaaatacccctnnaagtaaaactgatgacttgtacacgtcc
tcccaagattcaggatccagatccagtctaatcagaagaaaatcaactcacaggagtatc
attggatcccaaagccaggacagaaagctcagtacagaagaaacttgggatgaaagcgta
cctccagtttccttttggaggattctgaagctgaatataactgaatggccttattttgtg
gttggtgtatgttgcgccattataaatggagctctgcaaccaggattctcagtcatactt
tcaaggattataggaatcttcaccagagatgaggatgatgaaaccaaacgacagaacagt
aacttgttttcactgttgtttctaatccttggaattatttcttttattacatttttcctt
cagggcttcacgttcggcaaagcgggcgagatcctcaccaggcggctgcggtacctggtt
ttcaggtcgatgctgaggcaggatgtgagctggttcaatgaccctaaaaacaccacagga
gcattgacgaccaggcttgccagtgacgccgctcaagttaaaggggctataggctccagg
cttgctgtaattacccagaatattgcaaatcttggcacaggcattattatatccctcatc
tatggctggcagttaacacttctcctgttagcaattgtacccatccttgaagtaacagga
gttcttgaaatgaaaatgctgtctggacaagccctgaaagataagaaagaactagaaggt
gctgggaagattgccactgaagcgatagaaaacttccggactgttgtttctttgacttgg
gaggagaggtttgaatatatatatgcccagagtttgcaggtaccatacagaaactctttg
aggaaagcacatgtctttggaattacatttgccttcacccaggcaatgatgtatttctcc
tatgctggctgtttccagtttggtgcctacttggtggcacaaggcatcatggagtttcag
gatgttctcttagtgttctcagctattgtctttggtgccatggctgtgggacaggtcagt
tcatttgctcctgactatgccaaggccaaagtgtcagcagcccacgtcatcaatatcatt
gaaaaaattcctctgatcgacagctacagcacagaaggcctaaagccgagtacagtggaa
ggaaatgtggcatttaatgacgtcgtgttcaactaccccactcgaccagacatcccggtg
ctacgggggctgagcctggaggtgaagaagggccagacgctggccctggtgggcaacagc
tgctgcgggaagggcacggtcatccagctcctggagcggttctgtgaccccttggctggc
acagtgttaatcgatggcaaggaaataaagcagctgaatgtccagtggctgcgtgcgcac
atgggcatcgtgtcccaggagcccattctgtttgactgcagcatcggcgagaacatcgcc
tacggagacaacagccgggtcgtgtcccaggaggagattgagcgcgcggccaaggaggcc
aacatccaccccttcatcgagatgctgccagacaaatacaacaccagagtaggggacaaa
ggaactcagctctctggtggccagaaacagcgcattgccatagctcgcgcccttgttaga
cagcctcacatcttgcttctggatgaagctacctcggctctggacacggaaagtgaaaag
gttgtccaagaagccctggacaaagcccgagaaggccgcacctgcatcgtgatcgctcac
cggctgtccaccatccagaacgcagacttgatagtggtgtttcagaatggcagaatcaag
gagcacggcacacaccagcagctgctggcacagaaaggcatctatttcaccatggtcagt
gtccaggctgggacaaagcgccaatga

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