KEGG   Bos taurus (cow): 100299503
Entry
100299503         CDS       T01008                                 
Name
(RefSeq) THO complex subunit 2
  KO
K12879  THO complex subunit 2
Organism
bta  Bos taurus (cow)
Pathway
bta03013  Nucleocytoplasmic transport
bta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100299503
  09122 Translation
   03013 Nucleocytoplasmic transport
    100299503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    100299503
   03041 Spliceosome [BR:bta03041]
    100299503
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100299503
Spliceosome [BR:bta03041]
 Complex C
  Other components
   EJC/TREX
    100299503
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100299503
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 100299503
NCBI-ProteinID: XP_024851660
Ensembl: ENSBTAG00000047341
LinkDB
Position
1:complement(114370088..114376420)
AA seq 1584 aa
MLGTSAFPTTSGSASATGKGKMAAVTVVVPVEWIKNWEKSGRGEFLHLCRILSENKSLDS
STYRDFQQALYELSYHVIKGNLKHEQASNVLSDISEFREDMPSILADVFCILDIETNCLE
EKSKGDYFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQ
QKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFE
CRPEQDDFFISLLESYMSMCEPQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLI
DLDDLYVHLLPADNCIMDEHKREIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEEKVEK
PPDNQKLGLLEALLKIGDWQHAQSIMDQTPPYYAASHKLIALAICKLIHITIEPLYRKVG
IPKGAKGSPVSALQNKRAPKQAESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSF
MKEFQSDGRKQEDKEKTEVILSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQH
RYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTIL
FDYILSQIQKYDNLIAPVVDSLKYLTSLNYDILAYCIIEALANPEKEKMKHDDTTISSWL
QSLASFCGAVFRKYPIDLAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQ
LEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHALALPLCLLMAQQRNGIIFQESG
EKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKQVPSIDVLCNEFHTPHDAAFFLSR
PKYAHRILSKYDELKKSEKGSKQQHKVHKYITSCEMVMAPVHAAVVSLHVSKVWDDISPQ
FYATFWSLTMYDLAAPHTSYEREVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLL
EEEKKQMEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARF
VELVHQQKTPNFSTLLCYDRVFSDIIYTVSSCTENEASRYGRFLCCMLETVTRWHSDRAT
YEKECGNYPGFLTILRATGFDGGNKADQLDYDNFRHVVHKWHYKLTKASVHCLETGEYTH
IRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSY
MIPENEFHHKDPPPRNAVASVQNGPGAGPSSSSIGSVSKLDESSAEDTDKSRERSQCGVK
AVNKASSATPKGNSNNGNSGSNSSKTVKENDKEKGKEKEKEKKEKTPTTTPEARVLGKDG
KEKPKEERPNKDEKAREMKERTLKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSTQEKER
EKELSRERDTAKEMKSKENVKGGEKTPVSGFLKSPVPRSDIAEPEREQKRRKIDTHPSPS
HSSTVKDSLTELKESSAKLYINHIPPPLSKREMDKKDLDKSRERSREREKKDEKDKKERK
RDHLNNDREVPLDLTKRRKEENGTMGVSKHKSESSCESPYPNEKDKEKNKSKSSGKEKGG
DSFKSGKMDKISSGGKKGVDRSLS
NT seq 4755 nt   +upstreamnt  +downstreamnt
atgctcgggaccagcgccttccctacaacttccggttccgcctctgctactggtaagggg
aagatggcggccgtaactgtggtggttcctgtagagtggataaagaactgggagaaatca
gggagaggcgaatttttacatttatgccggatcctcagtgaaaataaaagcctcgatagt
tcaacttatagagatttccagcaagctctttatgaattatcataccatgtcattaaagga
aatctaaagcatgaacaggcatctaatgttcttagtgacattagtgaatttcgtgaggat
atgccctccattcttgctgatgtattctgcatattagatatcgagacaaattgtttagaa
gaaaaaagcaagggagactattttacacaattggtattagcatgtttgtatttagtttca
gacacagttctaaaggaacgcttggatccagaaacattggaatcgttagggcttatcaaa
caatcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttacaagcag
caaaaatttaatttgttaagagaagaaaatgaaggttatgccaagctgattgctgaattg
gggcaagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatcttta
ataggatgctttaatctggatcccaatagagttctggatgtcattttagaagtgtttgaa
tgcaggccggaacaagatgacttctttatatctttattagaatcttacatgagtatgtgt
gagccgcaaacactgtgtcatattcttgggttcaaattcaagttttatcaggaaccaaat
ggagagactccttcatctttatacagagttgcagcagtacttctacaatttaaccttatt
gatttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacac
aagcgagaaattgtagaagctaagcagatcgttagaaaacttacaatggttgtattgtct
tctgataaaattgacgagcgagagaaagaaaaggaaaaagaagaggagaaagtggagaag
ccacctgacaaccaaaaacttggtttgttggaagccttgttaaagattggtgattggcag
catgcgcagagcattatggatcagacgcctccatactatgcagcttcacataaactaata
gcccttgctatttgcaagctgattcatataactattgagcctctctaccgaaaagttggc
attcctaaaggtgctaaaggctcacctgttagtgctttgcaaaataagagagcgccaaaa
caagcagagagctttgaagatttgaggagagatgtcttcaatatgttctgttaccttggt
ccccacctttctcacgatcccattttatttgctaaagtggtgcggataggcaagtcattt
atgaaggagtttcagtctgatggacgcaaacaagaagataaagagaaaacggaagttatc
cttagctgtttgcttagcattactgaccaggtattacttccatctctttctttgatggac
tgcaatgcttgtatgtctgaggaactatgggggatgtttaaaacatttccatatcagcat
agatatcgtctgtatggccagtggaagaatgaaacttacaacagtcatccacttttagta
aaagttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaa
aatgtgaagccttctggaagacaaattgggaagctgagccacagcaatccaaccattttg
tttgattatatcttgtcacaaatacagaagtatgataacttgatagcacctgtagtagat
tcattgaaatacctcacttcgttgaattatgacatcttggcctattgtatcattgaagct
ttagctaatccagaaaaggagaaaatgaaacatgacgacacaaccatctcaagttggctt
cagagtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggt
cttcttcagtatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatactg
aaagaagtggtacaaaaaatggcaggaatagaaattacagaagaaatgacaatggagcaa
ctagaagccatgactggtggagaacaactaaaagctgaaggtggttattttggccagata
agaaacactaaaaaatcctcccagagattaaaggatgcactattagaccatgctcttgct
cttcctctctgcttgcttatggctcagcagaggaatgggataatctttcaggaaagtgga
gagaaacatttgaaacttgtgggaaaactctatgatcagtgtcatgataccctggtacag
tttggtgggtttttagcatctaatctaagcacagaagattatataaagcaagtgccttca
attgatgtgctctgtaatgaatttcacacacctcacgatgcagcatttttcctgtctagg
ccaaagtatgcacaccgtattttgtcaaagtatgacgaacttaaaaaatcagagaaggga
agtaaacagcagcataaagttcataagtacatcacatcatgtgaaatggtaatggctcct
gttcatgcagcagtggtttccttacacgtttccaaagtctgggatgacatcagtcctcaa
ttctatgccacattctggtcattgacaatgtatgaccttgcagctccacataccagctat
gaacgggaagtcaataaacttaaaatccagatgaaagcaattgatgataaccaggaaatg
cctccaaataaaaagaaaaaagagaaggagcgatgtactgcccttcaggacaagcttctc
gaagaagaaaagaaacagatggaacatgtacagcgagttctgcagagactgaaactggaa
aaggacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacag
ctgtgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgtttt
gttgaattggtacaccaacagaaaactccaaatttttccacacttctttgctatgatcga
gttttctctgatataatttacacagtctcaagctgtactgaaaatgaagctagtcgatat
gggagattcctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacg
tatgaaaaggaatgtggaaattacccaggattccttactatattacgagcaactggattt
gatggtggaaataaagctgatcaattagactatgacaattttcgacacgttgtacataaa
tggcactacaaactgaccaaggcatcggtacattgccttgaaacaggcgaatatacgcac
atcaggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaat
ctgggtcaagctttggaaagaagagtgcataaaatctgccaagaggaaaaagagaagagg
ccagatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatac
atgatacctgaaaatgagtttcatcacaaagacccccctccaaggaatgcagttgccagt
gtacaaaatgggcctggtgctgggccttcttcatcgtcgatcggaagtgtatctaagttg
gacgaaagcagtgccgaggacactgataaatcaagggagagatctcagtgtggtgtgaaa
gctgttaataaagcttctagtgccacaccaaaagggaattcaaataatggaaatagtggt
tctaacagcagcaaaactgttaaagaaaatgacaaagaaaaaggaaaagagaaagaaaaa
gagaaaaaagaaaagactccaactactactccagaggcccgagtacttggtaaagatggt
aaagaaaaaccaaaggaagaacggccaaataaagatgaaaaagcaagagagatgaaggaa
agaacacttaaatctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagat
gagaaattcaagaccactgtcccaaatgtagaatcaaagtcaactcaagaaaaggaaaga
gagaaggagctgtctagagaacgagatacagcaaaggaaatgaaatcaaaggaaaatgtt
aaaggaggagagaaaacaccagtttctgggttcttgaagtcacctgttccccgatcagat
attgcagagcctgaaagggaacagaaacgtcgcaaaattgatacccatccttctccatca
cattcctcaacagtaaaggacagtctcaccgaactcaaagagtcttcagcaaagctctac
attaatcatattcctccaccactgtccaagagagaaatggacaagaaagatttggacaag
tcaagggaaagatccagagaaagagaaaaaaaggatgaaaaggacaagaaagagcggaaa
agggatcacttaaacaatgaccgagaagtgccactggacttaaccaagaggcggaaagag
gaaaatggaacaatgggggtttcaaaacacaaaagtgaaagttcatgtgagtctccttat
ccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaaggcggt
gactcatttaaatctggaaagatggataaaatctcctctggtggcaaaaagggtgtggac
agatccctaagctga

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