Bos taurus (cow): 100300032
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Entry
100300032 CDS
T01008
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bta04131
]
100300032 (SH3TC1)
Membrane trafficking [BR:
bta04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
100300032 (SH3TC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
CFAP70_TPR_C
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
100300032
NCBI-ProteinID:
XP_005208413
Ensembl:
ENSBTAG00000047876
VGNC:
34582
LinkDB
All DBs
Position
6:114489932..114552095
Genome browser
AA seq
1384 aa
AA seq
DB search
MINQPWEAAQQLRPASRRAQTQRGSGAGSRGRWRPLCSPTGCGRRRRPAGPASEEPGAAI
WCPLSYRAGHRYGALDGQRSAWHAEPLAVRPPSAMEGPEEPAPRGNGPAGPWGGSGDHGV
REVAKSTSVSWERPRPEEAKATVRGDLTLQLLAVRRKSGLPDPNLQQALRGQLRLLENES
CEVARTLGELSARLLSIHSDQDRLVVTFKTFEEIWKFSTYHALGFTHHCLENLLMDQAFW
LLEPDEDQETAVRVQVDAEALRLAYESLLVQEGPFFVLCPDHHVRVRNGPQPFRRPPRGP
QADAATAVDSPAPSPGTSSEAEGAAAAAPEPLIPFHQWALRVPKDSVNDPLGGPVAPDVQ
LMAMGPALAVADCQGSGPEEMTFRSGDRIEILGAQVPGLPWCLGRHTASGQVGFVRTSLI
NVQGQASDLENVIFLSEEERSFFSREGHFSEEEARQLLRRTSSTNVCTMYRLDTSEEAET
QQQQEEQEMSPPCLNPEPQEILQTVKNVLKQCKSCRGCPEEPGSPGVHRASSGASLPDTE
EPFFCLDTGDDWADPEALGSQLLFLDSPGFQAGFQGLYDLSPPTLSSVFGGFTDEEELVR
RLAEARGVAKKAGLPMALARLCFLLGRLCVRQLKLSQARVYFEEALGVLGGRFGDLVLVA
AVYTSLASVHLRQKNKEKCAQVVPKALALLLGTPGHVGSSEADSSLLTLALRRAISSRSP
QAEARACFLLAKHHARLKQPEEAMPFLERLLLLLPEAAGTPGTSWPMDCYLLLASIYSQR
CLPHLALSCIRVASLRAQGSLGSALRSAALVLQNSPRLPLLPAQLAHYLRRALATLASGS
GQALHGPVYASLAQLYSQHGWQGRAIAFMAQAVETDARLGGCTVVDRLVALAWLHVLHRQ
SPAALGILESLLEAAVATPDQEGLITNMMAIALKRTGRTRRAAESYYRALRVARRLSRPQ
NEAVVLANFGALCLQAGAGGLAQHYLLEAVKLFSRLPSREGSPDFTRVLLRLGDLCTRRA
LARQAKCYYEWAFLVAVEMDHWESQLLAVQRLCHFYSAVVPNEARCVVYHEFQLSLARRV
NDKVLEGQLLETISQLYLSLGTERAYRSALEYTKRSLGVFIDLLKKDKEAHAWLQAGKIY
YVLRQSELVDLYIQAAQNAALYTGDPGLGLQLFEEAGDIFFNGTWDREKAVSFYRDRALP
LAVSTGSREAELRLCNKLSALLAETEAPQEGLEFAHTALALSLTLGDQLNQRVACHRLAA
LHHRLGHGELAEHFYLKALSLCTSPLEFDEETLYYVKVYLALGNIIFYDLKDPLDAAGYY
QLALAAAMGLGSKRAQMKLCARLASIYHHSLLDRETSLFFYQKARTFATELSVRRGRLAP
GPPS
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaccagccctgggaggcggcgcagcagctcaggcctgcctctcgccgggcccag
acgcagagaggaagtggggcaggaagcagggggcggtggcggccgctgtgcagtccaacg
ggctgtgggcggcggagacggcctgcggggcccgccagcgaggagccaggagcggccatc
tggtgcccgctgtcctacagagcggggcacaggtacggggctctggacgggcagaggtca
gcctggcatgctgagcccttggcagtgaggccgccatcagccatggagggcccagaggag
ccagcccccaggggcaatgggcccgcggggccctgggggggcagtggcgaccatggagtc
cgggaagtggccaagagcacgtccgtcagctgggagcgaccacggcccgaggaggccaag
gccaccgtccgaggggatctgaccttgcagctgctggcggtgaggcggaagagcgggctg
cccgaccccaacctgcaacaggccctgcggggccagctccgcctgctggagaacgagagc
tgcgaggtggcccgcaccctcggggagctgtcggccaggctgctgtccatccacagtgac
caggatcggctggtggtgacgtttaagacgtttgaagaaatctggaagttttccacctac
cacgctctcggcttcactcatcactgcctggagaacctgctcatggaccaggccttctgg
ctgctcgagcccgacgaggaccaggagacagccgtccgggtccaggtggatgcggaagcc
ttgaggctggcatacgagagcctcctcgtccaggaagggcctttcttcgtcctgtgtcct
gaccaccacgtgagagtgaggaacggcccccagcccttcaggcggcctccgaggggtcct
caggcagacgcggccacagcagtggactctccagccccgagtcccggcacatcctcggag
gcggagggggcagcggcggccgctccggagcccttgattccattccatcagtgggctctc
agggtgcccaaggactctgtcaacgaccccctgggtggacccgtggcgccggacgtccag
ctgatggccatgggcccggccttggccgtagcggactgccagggctcagggcccgaagag
atgaccttccgaagcggtgaccgcatcgagatcctgggcgctcaggtgcccggcctgccc
tggtgcctgggccggcacacagcctccggccaggtcgggtttgtgcggacgagcctcatc
aatgtgcagggccaggcgtctgacttggaaaacgtgatttttctcagtgaagaggaaagg
tctttctttagccgtgaaggacacttttctgaggaggaggccaggcagctgctgagaagg
acgtccagcacgaatgtctgcaccatgtacagactggacacatcagaagaagctgagacg
cagcagcagcaggaggaacaagaaatgtccccaccttgcctgaacccagagccacaggag
atcctgcagactgtgaagaatgttctaaaacaatgcaagtcctgccggggctgccccgag
gaaccagggtcccccggtgtccacagggcatccagtggtgcaagcctgccagacaccgag
gagcccttcttctgcctggacacaggagatgactgggccgacccagaggccctgggctct
cagctgctgttcctggactcaccgggattccaggctggtttccagggcctgtacgacctc
tccccacccacgctgagcagcgtgttcggcggcttcaccgacgaggaggagctggtcagg
cggctggctgaggcccgtggggtggccaaaaaagctgggctgcccatggccctggccagg
ctctgcttcctgctgggacggctgtgtgtgcggcagctgaagctgtcccaggcccgcgtg
tacttcgaggaagccctgggggtgctcgggggccgcttcggggacctggtcctggtggcg
gctgtgtacaccagcctggcctcagtccacctgcggcagaagaacaaggagaagtgcgca
caggtggtgcccaaggccttggccctgctcctggggacgcccggccacgtcggcagctcc
gaggctgattccagcctcctgaccctggccctgcggagggccatcagcagccgcagcccg
caggccgaggcccgggcctgtttcttgctggccaagcaccacgcccgcctcaagcagccg
gaggaggccatgcccttcctggagaggctgctgctgctgctccccgaggcagcggggacc
ccgggcacctcctggcccatggactgctacctgctgctggcaagcatctacagccaaagg
tgcttgccgcacctggcgctgagctgcatcagggtggcctcgctgcgggcacagggctcg
ctgggcagcgcgctccggagcgcggccctggtcctgcagaacagcccgcggctccccctc
ctgcctgcccagcttgctcactacctccggcgggcactggccaccctggcctctgggtcc
gggcaggccctacatggccctgtctacgccagcctggcccagctgtacagccagcatggg
tggcagggcagggccatcgccttcatggctcaggccgtggagacagatgcccggctgggc
ggctgcaccgtcgtggaccgcctggtggccctggcctggctgcatgtccttcacaggcag
agcccggcagccctgggcatcctggagtccctcctggaggccgcggtggccaccccagac
caagagggtctgatcaccaacatgatggccattgcactgaaaagaaccggcaggacccgg
cgggcggccgagagctactaccgcgccctgagggtggcccggcgcctgagccgcccgcag
aacgaggcggtggtcctggccaacttcggggccctgtgtctgcaggccggcgctggcggg
ctggcccagcactacctcctggaggccgtgaagctcttctcgcggctgcccagcagggag
ggcagcccggacttcacccgggtgctgctgcggctgggggacctgtgcacccgcagggcg
ctcgcccggcaggccaagtgctactacgagtgggccttcctggttgctgtggagatggac
cattgggagagccagctgctcgccgtccagcggctctgccacttctacagcgcggttgtg
cccaacgaggcccgctgcgtcgtctaccacgagttccagctctcgctggcccgcagagtg
aacgacaaggtgctggaggggcagctcctggagaccattagccagctctacctgtccctg
ggcaccgagcgagcctacaggtccgccctggagtacaccaagcgcagcctgggggttttc
atcgacctgctgaagaaggacaaggaggcgcacgcctggttgcaggcggggaagatctac
tacgtgctacggcagagcgagctggtggacctgtacatccaggcggcgcagaacgccgcc
ctgtacacgggggaccccggcctggggctgcagctcttcgaggaggctggagacatcttc
ttcaacgggacctgggatcgcgagaaagcggtgtcattctaccgggaccgggcactgccc
ctggcggtgtccacggggagccgggaggccgagctgcggctgtgcaacaagctgtccgcg
ctgctggctgagacggaggcgccccaggagggcctggagttcgcccacacggccctggca
ctcagcctcaccctgggggaccagctgaaccagcgggtggcctgccaccggctggccgcc
ctgcaccaccggctgggccacggcgagctggccgagcacttctacctcaaggcgctgtcg
ctctgcacctcaccgctggagttcgacgaggagaccctgtactatgtgaaggtgtacctg
gcacttggcaacatcatcttctacgacctcaaggacccgctggacgcggccgggtactac
cagctggcgctggcggcggccatgggcctgggcagcaagcgggcccagatgaagctgtgc
gcgcgcctggcctccatctaccaccactccctgctcgaccgcgagacgtccctgttcttc
taccagaaggcgcggaccttcgccacggagctcagcgtccgccggggccgcctggccccc
gggcccccgtcctga
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