Bos taurus (cow): 100301114
Help
Entry
100301114 CDS
T01008
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X6
KO
K12821
pre-mRNA-processing factor 40
Organism
bta
Bos taurus (cow)
Pathway
bta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100301114 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bta03041
]
100301114 (PRPF40A)
Spliceosome [BR:
bta03041
]
Complex A
U1 snRNP components
U1 related factors
100301114 (PRPF40A)
Complex B
100301114 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
100301114
NCBI-ProteinID:
XP_002685399
Ensembl:
ENSBTAG00000048151
VGNC:
33379
LinkDB
All DBs
Position
2:43470302..43528881
Genome browser
AA seq
929 aa
AA seq
DB search
MCSGSGRRRSSLSPTMRPGTGAERGGLMMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQ
MMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTTSGAKSMWT
EHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKES
RWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESSKQEECTTTSAAPVPTTEIPTT
MSTMAAAEAAAAVVAAAAAAAAAAAAANASASTSASSTVSGTVPVVPEPEVTSIVATVVD
NENTVTISTEEQAQLTSTPSVQDQSEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTY
TWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQT
EKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIY
EDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEE
LQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLH
SMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGF
VVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKES
AFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHH
SKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKK
SKKHKKKSKKRRHKSDSPESDAEREKDKKEKDREGEKDRTRQRSESKHKSPKKKTGKDSG
NWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatgaggccggggacg
ggagccgagcgtggaggcctcatgatggggcatcctggcatgcattatgccccaatggga
atgcatcctatgggtcagagagcgaatatgcctcctgtacctcatggaatgatgccacaa
atgatgcccccaatgggaggaccaccaatgggacaaatgcctggaatgatgtcttcagta
atgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcctgccttaccgcca
ggagtaaataatatggatgtagcagcaggtacaacttctggcgcaaaatcaatgtggact
gaacataaatcacctgatggaaggacctactactacaatactgaaacaaaacagtctact
tgggagaaaccagatgatcttaaaactcctgctgagcaacttttatctaaatgcccttgg
aaggagtacaagtctgactctggaaagccttattattacaattctcaaacaaaagaatct
cgctgggccaaacctaaagaacttgaagatcttgaaggataccagaataccattgttgct
ggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagaaagcagtaaa
caagaagagtgcaccacaacatcagcagccccagttcctacaacagaaattccaaccaca
atgagcaccatggctgctgcagaagcagcagctgctgttgttgcagcagcagccgcagca
gcagcagctgctgctgcagccaatgccagtgcttccacttctgcctctagtactgtcagt
ggaactgttccagttgttcctgagcctgaggttacttcgattgttgctactgttgtagat
aatgaaaatacagtaacaatttctactgaagaacaagcacaacttactagtaccccttct
gttcaggatcaaagtgaagtgtctagtaatactggagaagaaacatctaagcaggaaact
gtagctgattttactcccaaaaaagaagaggaagaaagccaaccagcaaaaaaaacgtat
acgtggaatacgaaagaggaggcaaagcaagcatttaaagaattattaaaagaaaagcgt
gtaccatctaatgcttcatgggagcaagctatgaaaatgatcattaatgatccacgatat
agtgctttagcaaagttgagtgaaaaaaagcaggcctttaatgcttataaagtccaaaca
gagaaagaagaaaaagaagaagcaagatccaaatacaaagaggctaaggaatcctttcag
cgttttcttgagaatcatgaaaaaatgacttccacaactagatacaaaaaagcagagcaa
atgtttggagagatggaagtctggaatgcaatatcagaacgtgatcgtcttgaaatctat
gaagatgttttattctttctttcaaaaaaagaaaaggagcaagcaaagcagttgcgaaag
aggaattgggaagccttaaaaaacatacttgacaacatggctaatgtgacatattctact
acttggtctgaagcccagcagtatctgatggataatccaacttttgcagaagatgaggaa
ttacagaatatggataaagaagatgcattaatttgctttgaggaacacattcgagcttta
gaaaaggaagaggaagaagaaaaacaaaagagtttgcttcgtgaaaggagacgacagcgt
aaaaatagagaatcttttcagatatttttagatgaactgcatgaacatggacaactgcat
tctatgtcatcttggatggaattgtatccaacaattagttctgacattagattcactaat
atgcttggtcagccgggatcaactgcacttgaccttttcaagttttatgttgaggatctt
aaagcacgttatcatgatgaaaagaagataataaaagacattctgaaggataaaggattt
gtagttgaagtaaatactacttttgaagactttgtggcaataatcagttcaactaaaaga
tcaaccacattagatgcaggaaatattaagctggctttcaatagtttactagaaaaggca
gaagcccgtgaacgtgaaagagaaaaagaggaggctcggaagatgaaacgaaaagaatct
gcatttaagagtatgttgaaacaagctactcctccaatagaattggatgctgtctgggaa
gatatccgggagagatttgtaaaagagccagcatttgaggatataactctagaatctgaa
agaaaacgaatatttaaagattttatgcatgtgcttgagcatgaatgtcaacatcatcat
tcaaaaaacaagaagcattctaagaaatctaaaaaacatcacaggaagcgctcccgctct
cgatcagggtcagattcagatgatgatgacagccattcaaagaaaaaaagacagcgatca
gagtctcgttctgcttcagaacattcttctagtgctgaatctgagagaagttacaagaaa
tcaaaaaaacataagaagaaaagcaagaagagaagacataaatcagactctccagagtca
gatgctgaaagagaaaaggataaaaaagaaaaagaccgggaaggcgaaaaagacagaact
agacaaagatcagaatcaaaacacaaatcacctaagaaaaagactggaaaggattctggt
aattgggatacttctggcagtgaactgagtgaaggagaattggaaaagcgcagaaggacc
cttttggagcaactggatgatgatcaataa
DBGET
integrated database retrieval system
