Bos taurus (cow): 100336579
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Entry
100336579 CDS
T01008
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
bta
Bos taurus (cow)
Pathway
bta04014
Ras signaling pathway
bta04015
Rap1 signaling pathway
bta04020
Calcium signaling pathway
bta04024
cAMP signaling pathway
bta04080
Neuroactive ligand-receptor interaction
bta04082
Neuroactive ligand signaling
bta04713
Circadian entrainment
bta04720
Long-term potentiation
bta04724
Glutamatergic synapse
bta05010
Alzheimer disease
bta05014
Amyotrophic lateral sclerosis
bta05016
Huntington disease
bta05017
Spinocerebellar ataxia
bta05020
Prion disease
bta05022
Pathways of neurodegeneration - multiple diseases
bta05030
Cocaine addiction
bta05031
Amphetamine addiction
bta05033
Nicotine addiction
bta05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100336579 (GRIN1)
04015 Rap1 signaling pathway
100336579 (GRIN1)
04020 Calcium signaling pathway
100336579 (GRIN1)
04024 cAMP signaling pathway
100336579 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100336579 (GRIN1)
04082 Neuroactive ligand signaling
100336579 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100336579 (GRIN1)
04720 Long-term potentiation
100336579 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
100336579 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100336579 (GRIN1)
05014 Amyotrophic lateral sclerosis
100336579 (GRIN1)
05016 Huntington disease
100336579 (GRIN1)
05017 Spinocerebellar ataxia
100336579 (GRIN1)
05020 Prion disease
100336579 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
100336579 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
100336579 (GRIN1)
05031 Amphetamine addiction
100336579 (GRIN1)
05033 Nicotine addiction
100336579 (GRIN1)
05034 Alcoholism
100336579 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bta04040
]
100336579 (GRIN1)
Ion channels [BR:
bta04040
]
Ligand-gated channels
Glutamate (ionotropic)
100336579 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
100336579
NCBI-ProteinID:
XP_024855439
VGNC:
29645
LinkDB
All DBs
Position
11:106168887..106196131
Genome browser
AA seq
970 aa
AA seq
DB search
MSTMRLLTLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHVILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYESLDQLSYDHKRGPKAEKVLQFDPGTKNVTALLLEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
VDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTVRGRAPSPTCPTLPSPPCLCPVHQARPRHPTTRLRPRGP
SALTAAHPAH
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgactctcgccctgcttttctcctgctccttcgcccgcgcc
gcctgcgaccccaagatcgtcaacattggcgcggtgctgagcacgcggaagcacgagcag
atgttccgcgaggctgtgaatcaggccaacaagcggcatggctcctggaagatccagctc
aacgccacctccgtcacccacaagcccaacgccatccagatggccctgtcggtgtgcgaa
gacctcatctccagccaggtctacgccatcctagttagccacccacctacccccaacgac
cacttcacacccacccccgtctcctacacggccggcttctaccgcatccctgtcctgggg
ctgaccacgcgcatgtccatctactcagacaagagcatccacctgagcttcctgcgcacc
gtgccgccctactcccaccagtccagcgtgtggttcgagatgatgcgcgtctacagctgg
aaccacgtcatcctcctggtcagcgacgaccacgagggccgggcggcgcagaaacgcctg
gagacgctgctggaggagcgcgagtccaagagtaaaaaaaggaactatgaaagcctcgac
caactgtcctatgaccacaagcgcggacccaaggcggagaaggtgctgcagttcgacccg
gggaccaagaacgtgacggcgctgctgctggaggcgcgggagctggaggcccgggtcatc
atactctccgccagcgaggacgacgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgacgggctcggggtacgtgtggctggtgggggagcgcgagatctcggggaacgccctg
cgctacgccccggacggcatcatcgggctgcagctcatcaacggcaagaacgagtcggcg
cacatcagcgacgccgtgggcgtggtggcccaggccgtgcacgagctgctcgagaaggag
aacatcaccgacccgccgcggggctgtgtgggcaacaccaacatctggaagaccgggccg
ctcttcaagagggttctgatgtcttccaagtatgcagacggggtgaccggccgtgtggaa
ttcaatgaggatggggaccggaagtttgccaactacagcatcatgaacctgcagaaccgc
aagctggtacaagtgggcatctacaacggcactcatgtcattcccaatgacaggaagatc
atctggccgggtggagagactgagaaacctcgcggctatcagatgtccaccaggttgaag
atcgtgacgatccaccaggagcccttcgtgtatgtcaagcctacgctgagcgacggcacg
tgcaaggaggagttcaccgtcaacggggacccggtcaagaaggtgatctgcaccgggccc
aatgacacgtcgccgggcagcccgcgccacacggtgcctcagtgctgctacggcttctgc
gtcgatctgctcatcaagctggcgcggaccatgaacttcacgtacgaagttcacctggtg
gccgatggcaagttcggcactcaggagcgggtgaacaacagcaataagaaggagtggaac
gggatgatgggcgagctgctcagcgggcaggcggacatgatcgtggccccgctgaccatc
aacaacgagcgcgcgcagtacatcgagttctcgaagcccttcaagtaccagggcctgacc
attctggtcaagaaggagatcccccggagcacgctggactccttcatgcagcccttccag
agcacgctgtggctgctggtggggctgtccgtgcacgtggtggccgtgatgctgtacctg
ctggaccgcttcagccccttcggccggttcaaagtgaacagcgaggaggaggaggaggat
gcgctgactctgtcttcggctatgtggttctcctggggcgtcctgctcaattcaggcatc
ggggaaggcgcccccagaagcttctcggcgcgcatcctgggcatggtgtgggcggggttc
gccatgatcattgtggcctcttacaccgccaacctggcagccttcctggtgctggaccgg
cccgaagagcgcattaccggcatcaacgacccgcgactgaggaatccctcggacaagttc
atctacgcgacggtgaagcagagctcggtggacatctacttccggcggcaggtggagctg
agcaccatgtaccggcatatggagaagcacaactacgagagcgcggcggaggccatccag
gccgtgcgcgacaacaagctgcacgctttcatctgggactcggcggtgctggagttcgag
gcctcgcagaaatgcgacctggtgaccacgggcgagctcttcttccgctcgggctttggc
atcggcatgcgcaaggacagcccctggaagcagaacgtctccctgtccatcctcaagtcc
cacgagaacggcttcatggaagacctggacaagacgtgggttcggtaccaggagtgcgat
tcgcgcagcaacgcccctgctaccctcaccttcgagaatatggcaggggtcttcatgctg
gtggctgggggcatcgtggccgggatcttcctgatcttcatcgagatcgcctataaacgg
cacaaggacgctcggcggaagcagatgcagctggcgtttgcggccgtgaacgtgtggagg
aagaacctgcaggatagaaagagtggtagagcagaacccgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcttccagcttcaagagacgtaggtcctccaaagac
acggtaaggggaagagcgcccagtcccacgtgtccgactctcccctcgcccccgtgtctg
tgtcccgtgcatcaggcccgccctcgccatcccaccacccgcctccgcccgcgcggccct
tctgcgctcaccgctgcccacccggcacactag
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