Bos taurus (cow): 107131508
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Entry
107131508 CDS
T01008
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X2
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
bta
Bos taurus (cow)
Pathway
bta04080
Neuroactive ligand-receptor interaction
bta04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107131508 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
107131508 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bta04040
]
107131508 (TRPV1)
Ion channels [BR:
bta04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107131508 (TRPV1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
107131508
NCBI-ProteinID:
XP_015314133
BGD-bta:
BT19549
Ensembl:
ENSBTAG00000018880
VGNC:
36397
UniProt:
E1BGM0
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Position
19:complement(24278398..24301536)
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AA seq
843 aa
AA seq
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MENLARMKKWGSSESRESQDLPQEDSCPDPLDGDPNYRPAPTKPHSFPTAKSRSRLFGKG
DSEDTSLMDCSYEEGQLASCPAITISPVVIIQRSGDGPTCVRQLSQDSAATENLKLYDRR
KIFEAVAQNNCEELESLLLFLQKSKKHLMDSEFKDPETGKTCLLKAMLNLHNGQNDTIPL
LLEIARQTDSLKELVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGANVQAAANGDF
FKKTKGRPGFYFGELPLSLAACTNQLGIVKFLLQNSWQPADISARDSVGNTVLHALVEVA
DNTADNTKFVTSMYNEILILGAKIHPTLKLEELTNKKGLTPLALAARSGKIGVLAYILQR
EIQEPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLV
EPLNRLLQDKWDRFVKRIFYFNFFVYCLYMIIFTTVAYYRPAGGRPPFKPKHTVGDYFRI
TGEIISVAGGIYFFSRGIQYFLQRRPSLKTLFVDSYSEMLFFMQSLFMLATVVLYFCHRK
EYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAV
VTLIEDEKNDSVSVELSQHRWRGHGCRSADSYNSLYSTCLELFKFTIGMGDLEFTENYDF
KAVFVILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKC
MRKAFRSGKLLQVGYTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGIKRTLSF
SLRSSRVAGRNWKNFALVPLLRDASTRERHPAQPEEVHLRHFTGSLKPEDAEIINDSVAL
GEK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggagaatctggcacggatgaagaaatgggggagctcagaatcacgggaatctcaggac
ctgcctcaagaggactcctgcccagatcccctagatggagaccctaactacaggccagct
ccaaccaagccccacagcttccccacagccaagagtcgcagccgactctttggcaagggt
gactcggaggacacatccctcatggactgctcttatgaggaaggccagctggcatcctgc
ccagccatcaccatcagccctgtagtcatcatccagaggtctggggatggccccacctgt
gtcaggcagctgtcccaggactctgctgccactgagaacctcaagctctacgatcgcagg
aagatcttcgaagcagttgctcagaataactgtgaggagctggagagcctgctgctcttc
ctgcagaagagcaagaagcatctcatggacagcgagttcaaagacccagagacagggaag
acctgcctgctgaaagccatgctcaaccttcacaacgggcagaacgacaccatccccctg
ctcctggagatagcccggcagacggacagcctgaaggagcttgtcaacgccagctacacg
gacagctactataagggccagacagcactgcacatagccatcgagaggcggaacatggcg
ctggtgaccctgctggtggagaatggggccaatgtccaggctgcagccaacggggacttc
tttaagaaaaccaaagggcgacctggcttctattttggtgagctgcccctctccctggct
gcgtgtaccaaccagctgggcatcgtgaagttcctgctgcagaactcctggcagccagcc
gacatcagtgccagggactcagtgggcaacacggttctgcatgcgctggtggaggtggcc
gacaacacggctgacaacaccaagttcgtgacgagcatgtacaatgagattctgatcctg
ggggccaaaattcaccctacgctgaagctggaggagctcaccaacaagaaggggctgacg
ccgctggctctggccgcccggagtgggaagatcggggtcttggcttatattctccagagg
gagatccaggaacctgagtgcaggcacctgtccagaaagttcaccgagtgggcttacggg
cctgtgcactcctcactctacgacctgtcctgtatcgacacctgtgagaagaactcggtg
ctggaggtgatcgcctacagtagcagcgagacccctaatcgccatgacatgctcttggtg
gagccgctgaaccgcctcctgcaggacaagtgggacagatttgtcaagcgcatcttctac
ttcaactttttcgtctactgcttgtatatgatcatcttcaccacggtcgcctactacaga
cctgcgggaggccggcctccctttaagccgaaacacacggtaggggactatttccgaatc
actggagagattatttctgtggcaggtggtatctactttttttcccgagggattcagtat
ttcctgcaaaggcggccgtcgctgaagaccttgtttgtggacagctatagtgagatgctt
ttcttcatgcagtcgctgttcatgctggcgaccgtggtgttgtacttctgccaccgcaag
gagtacgtggcctccatggtgttctccctggccatgggctggaccaacatgctctactac
acccgcggcttccagcagatgggcatctacgccgtcatgatcgagaagatgatcctcaga
gacctgtgtcgcttcatgtttgtgtacctcgtgttcctgttcgggttttccacagcggtg
gtgacactgattgaggatgaaaagaatgactctgtgtcggtcgagttgtcgcaacacagg
tggcgagggcacggctgccggtcggccgacagctacaacagcctgtactccacgtgtctg
gagctgttcaagttcaccattggcatgggggacctggaattcaccgagaactatgacttc
aaggctgtctttgtcatcctattgctggcctatgtgattctcacgtacatcctcctgctc
aacatgctgatcgccctcatgggcgagacggtcaacaaaattgcgcaggagagcaagaac
atctggaagctgcagagagccatcaccatcctagacacggagaagagcttcctcaagtgt
atgaggaaggcctttcgctcaggcaagctgctgcaggtggggtacacgcctgatggcaag
gacgactacaggtggtgtttcagggtggacgaggtgaactggaccacctggaacaccaac
gtgggcatcatcaacgaagacccgggcaactgcgagggcatcaagcgcaccctgagcttc
tccttgcggtcaagccgagttgcagggaggaactggaagaactttgccctggttcccctc
ttaagagacgcaagtactcgagaaaggcaccctgcccagcctgaagaagttcacctgagg
cacttcacagggtccctcaagcccgaagatgctgagatcatcaacgattctgtggcttta
ggggagaagtga
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