KEGG   Bos taurus (cow): 280875
Entry
280875            CDS       T01008                                 
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
bta  Bos taurus (cow)
Pathway
bta03015  mRNA surveillance pathway
bta05164  Influenza A
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    280875 (CPSF4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    280875 (CPSF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bta03021]
    280875 (CPSF4)
   03019 Messenger RNA biogenesis [BR:bta03019]
    280875 (CPSF4)
Transcription machinery [BR:bta03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     280875 (CPSF4)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     280875 (CPSF4)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_3 zf-CCCH_12 zf-CCHC zf-CCCH_4 zf-CCCH_RBM22 zf-CCCH_DUS3L zf-C3H1 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 280875
NCBI-ProteinID: NP_776367
BGD-bta: BT16046
Ensembl: ENSBTAG00000002090
VGNC: 27673
UniProt: O19137
LinkDB
Position
25:complement(36959412..36971751)
AA seq 243 aa
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPTKRTPQVIGVMQSQNSSAGSRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFL
SGQ
NT seq 732 nt   +upstreamnt  +downstreamnt
atgcaggaaatcatcgccagcgtggaccacatcaagtttgacttggagatcgccgtggag
cagcagctcggggcgcagccgctgcccttccccggcatggacaagtcaggggctgctgtc
tgcgaattctttttgaaagctgcctgtggcaaagggggcatgtgcccgttccgccacatc
agtggtgagaagacggtggtgtgcaaacactggctgcgggggctgtgcaagaagggggac
cagtgcgagttcctgcacgagtacgacatgaccaagatgcccgagtgctacttctactcc
aagttcggggagtgcagcaacaaggagtgccccttcctgcacatcgaccccgagtccaag
atcaaggactgcccatggtacgaccgcggcttctgcaagcacggccccctgtgcaggcac
cggcacacgcggagggtcatctgtgtcaattacctcgtgggattctgcccggaggggccc
tcgtgtaaattcatgcaccctcgatttgaactgccgatgggaaccaccgagcagccccca
ctgccgcagcagacgcagccacccacgaagagaactccgcaggtcatcggggtcatgcag
agtcaaaacagcagcgcgggcagccgaggaccccggccgctggagcaggtcacatgctac
aagtgtggtgaaaaaggacactatgccaacagatgtaccaaagggcacttggcctttctc
agcggacagtga

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