KEGG   Bos taurus (cow): 281370
Entry
281370            CDS       T01008                                 
Symbol
UBB
Name
(RefSeq) polyubiquitin-B
  KO
K04551  ubiquitin B
Organism
bta  Bos taurus (cow)
Pathway
bta04120  Ubiquitin mediated proteolysis
bta04137  Mitophagy - animal
bta04140  Autophagy - animal
bta05012  Parkinson disease
bta05022  Pathways of neurodegeneration - multiple diseases
bta05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    281370 (UBB)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    281370 (UBB)
   04137 Mitophagy - animal
    281370 (UBB)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    281370 (UBB)
  09164 Neurodegenerative disease
   05012 Parkinson disease
    281370 (UBB)
   05022 Pathways of neurodegeneration - multiple diseases
    281370 (UBB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bta04121]
    281370 (UBB)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bta04147]
    281370 (UBB)
Ubiquitin system [BR:bta04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   281370 (UBB)
Exosome [BR:bta04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   281370 (UBB)
  Exosomal proteins of other body fluids (saliva and urine)
   281370 (UBB)
  Exosomal proteins of colorectal cancer cells
   281370 (UBB)
  Exosomal proteins of bladder cancer cells
   281370 (UBB)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 281370
NCBI-ProteinID: NP_776558
BGD-bta: BT13380
Ensembl: ENSBTAG00000017246
VGNC: 107281
UniProt: P0CG53
Structure
LinkDB
Position
19:complement(33249950..33251856)
AA seq 305 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLFDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGC
NT seq 918 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt
gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag
cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac
atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagattttc
gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgag
aacgtgaaggccaagatccaggataaggagggcattccccccgaccagcagaggctcatc
tttgccggcaagcagctggaagatggccgcactctttttgattacaacatccagaaagag
tcgaccctgcacctggtcctccgtctgaggggtggtatgcagatcttcgtgaagaccctg
accggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggcc
aagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggcaag
cagctggaagatggccgcactctttctgattacaacatccagaaagagtcgaccctgcac
ctggtcctccgtctgaggggtggtatgcagatcttcgtgaagaccctgaccggcaagacc
atcaccctggaagtggagcccagtgacaccatcgagaacgtgaaggccaagatccaggat
aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat
ggccgcactctttctgattacaacatccagaaagagtcgaccctgcacctggtccttcgt
ctgaggggtggctgttaa

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