Bos taurus (cow): 282018
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Entry
282018 CDS
T01008
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform 1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
282018 (PTBP1)
03041 Spliceosome [BR:
bta03041
]
282018 (PTBP1)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
282018 (PTBP1)
Spliceosome [BR:
bta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
282018 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
282018
NCBI-ProteinID:
NP_001289713
Ensembl:
ENSBTAG00000045828
VGNC:
52809
UniProt:
Q8WN55
LinkDB
All DBs
Position
7:43367474..43378191
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AA seq
557 aa
AA seq
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MDGIVPDIAVGTKRGSDELFSACVTNGPFIMSGTSASTANGNDSKKFKGDSRSAGVPSRV
IHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTEEAANTMVNYYTSVTPV
LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAP
GIMSASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGA
GNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKVLFNKKENALVQMADGSQAQLAMSHL
NGHKLHGKPVRITLSKHQSVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSA
TLHLSNIPPSISEDDLKILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNH
DLGENHHLRVSFSKSTI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcgtcccagacatagcagttggtacaaagcggggatctgacgaactcttc
tctgcctgcgtcactaacggaccctttatcatgagcggcacctcggcgtccacagcaaat
ggaaacgacagcaagaagttcaagggggacagcaggagtgcgggcgtgccctccagggtg
atccacatccgcaagctgcccggcgatgtcaccgagggggaggtcatttccctggggctg
cccttcggaaaggtcaccaatctcctgatgctgaaagggaagaatcaggccttcatcgag
atgcacacagaagaggctgccaacaccatggtgaactactacacgtcggtgacgcctgtg
ctgcgcggccagcccatctacatccagttctccaaccacaaggagctcaagacagacagc
tcccctaaccaggcgcgggcccaggcggccttgcaggctgtgaactcagtccagtcagga
aacctggccctggcagcctcggccgcggcggtggatgcgggcatggccatggctggccag
agcccagtgcttaggatcatcgtggagaacctcttctacccagtgaccctggacgtgctg
caccagatcttctccaagtttggcactgttcttaagatcatcactttcaccaagaacaac
cagttccaggcattgctgcaatacgcggaccccgtgagcgcccagcacgccaagctgtcg
ttggatggccagaacatctacaacgcatgctgcacactgcgcatcgacttctccaagctc
accagcctaaacgtcaagtataacaacgacaagagccgcgactacacgcgccctgacctg
ccgtccggtgacagccagccctcgctggaccagaccatggctgctgcctttggtgcgcct
ggtataatgtcagcctctccgtatgcaggagctggtttccctcccacctttgcaattcct
caagccgcaggtctctctgttcctaatgtgcatggggctttggcccctctggctattccg
tcggcagcggcagcagcagcggcagcgggccggatcgccatcccaggcctggcgggggca
ggcaactctgtcctgctggtcagcaatctcaaccctgagagagtcacaccccaaagcctc
tttattcttttcggcgtgtatggagatgtgcagcgtgtgaaggtcctgttcaacaagaag
gagaacgccctggtgcagatggccgatgggagccaggcacagctggccatgagtcacctc
aatgggcacaagctgcacggaaagccagtgcgcatcacactctctaagcaccagagcgtg
cagctgccccgcgagggccaggaggaccagggcctgaccaaggactatggaaactcgccc
ctgcaccgcttcaagaagcctggctccaagaacttccagaacatcttcccaccctcggcc
actctgcacctctccaacatcccgccctccatctctgaggatgacctcaagattcttttc
tccagtaacggcgggatcgtcaaagggttcaagttcttccagaaggaccgcaagatggcg
ctgatccagatgggctcagtggaggaggccatccaggcactcatcgacctgcacaaccat
gacctgggtgagaaccaccacctgcgggtgtccttctccaagtccaccatctag
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