Bos taurus (cow): 282061
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Entry
282061 CDS
T01008
Symbol
SCN5A
Name
(RefSeq) sodium channel protein type 5 subunit alpha
KO
K04838
voltage-gated sodium channel type V alpha
Organism
bta
Bos taurus (cow)
Pathway
bta04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
282061 (SCN5A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bta04040
]
282061 (SCN5A)
Ion channels [BR:
bta04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
282061 (SCN5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
282061
NCBI-ProteinID:
NP_776883
Ensembl:
ENSBTAG00000009155
VGNC:
34352
UniProt:
Q8WMP8
LinkDB
All DBs
Position
22:complement(11975423..12080448)
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AA seq
2022 aa
AA seq
DB search
MAAFLLPRGTSSFRRFTRESLAAIEKRMAEKQARSSAASQESRDGLPEEEAPRPQLDLQA
SKKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALHVLSPFHPI
RRVAVKILVHSLFSMLIMCTILTNCVFMAQHDPPPWTKYVEYIFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIIMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTVLNGTNSTNASVEAD
GLIWASLDDYLNDPENYLLKNGTSDVLLCGNSSDAGTCPEGYRCLKAGGNPDHGYTSFDS
FAWAFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYE
EQNQATIAETEEKEKRFQEAMELLKKEQEALAIRGVDTVSRSSLEMSPLAPVTTHERRSK
RRKRMSSGMEECGDDKFPKSDSEDGPRAVNRFSITHGLSRTSMKPRSSHGSIFTFRRRDL
GSETDFADDENSTAGDSESHRTSLLVPWPLRRPSTLGQPSPGTSTPGHVLNGKRNSTVDC
NGVVSLLGAGDPEATSPGSHLLHPMKLERPPDTTTPSEEPGRPQTLTPQAPCVDGFEEPG
ERQRALSAVSVLTSALEELEESQRRCPPCWIRFAQHYLIWECCPLWMSIKQKVKFMVMDP
FADLTITMCIVLNTLFMALEHYNMTTEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYF
QQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFCLLRVFKLAKSWPTLNTLIKIIGNSVG
ALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQRHRISDSGLLPRWHMMDFFHAFLIIFRIL
CGEWIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDEDGE
MNNLQLALARIQRGLRFIKRTTWDFCCVLLQRPPQKPAALASQGQLPGCIATSSPPPQPE
SEKAPPARKETRFEEGQRPGQGAPGDAEPVCVPIAVAESDTDDPEEDEENSLSTEEESSK
QQESQLASGSPEALPEPRVWSQVSETTSSGAEASEVQADLRQQRRAEAPAPGCSELPEDS
YSEGSTADMTNTADLLEQIPDLGEDVKDPEDCFTEGCVRRCPCCTVDTTQAHGKVWWRLR
KTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEML
LKWVAYGFKKYFTNAWCWLDFLIVDVLLISLVANALGFAEMGPIKSLRTLRALRPLRALS
RFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNY
TIVNNKSDCESFNVTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYE
EQPQWEYNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPE
KVNILAKINLLFVGIFTAECIFKMVALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKY
FFSPTLFRVIRLARISRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFG
MANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLPNS
NGSRGNCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFY
EIWEKFDPEATQFIEYLALSDFADALSEPLRIPKPNQISLINMDLPMVSGDRIHCMDILF
AFTKRVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSATIIQRAFRRH
LLQRSVKHASFLYRQQAGSSGLSEEDAPEQEGLIAYMMNENFSRRPGPPSSSSVSSTSFP
PSYDSVTRATSDNPQVRASDYSPSEDLADFPPTPDRDRESIV
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttcctgttacctcggggcaccagcagcttccgcaggttcacccgggagtct
ctggcggccatcgagaagcgcatggcagagaagcaggcccggagctcggccgcctcgcag
gagagccgcgacgggctgcccgaggaggaggcgccccggccccagctggacctgcaagcc
tccaaaaagctgccggatctctacggcaacccaccccgagagctcatcggggagcccctg
gaggacctggaccccttctatagcactcaaaagaccttcatcgtcctgaacaaaggcaag
accatcttccggttcagcgccaccaacgccttgcatgtcctcagccccttccaccccatc
cggagagtggctgtgaagatcttggtgcattcgctcttcagcatgctcatcatgtgtacc
attctgaccaactgcgtgttcatggcccagcacgaccctccgccctggaccaaatatgtc
gagtacatcttcactgccatctacacctttgagtctctggtcaagattctggctcgaggc
ttctgcctgcacgcgttcaccttccttcgggacccgtggaactggctggacttcagcgtg
atcatcatggcatacaccactgaatttgtggacctgggcaatgtctcagctttacgtacc
ttccgagtcctccgggccctgaaaactatatcagtcatttcaggcctgaagaccatcgtg
ggggccctgatccagtctgtgaagaagctggccgatgtgatggtcctcacggtcttctgc
ctcagcgtcttcgccctcatcggccttcagctcttcatgggcaacctgaggcacaagtgc
gtccgcaacttcacggtgctcaacggcaccaacagcaccaatgcctccgtggaggccgac
ggcctgatctgggcatcgctggacgactacctcaacgacccagaaaattacctactcaag
aatggcacctctgacgtgttactgtgtgggaacagctccgacgctgggacatgtcctgag
ggctacaggtgcctgaaggcaggtgggaaccctgaccatggctacaccagcttcgactcc
ttcgcctgggccttcctcgcactcttccgactgatgacgcaggactgctgggagcgcctc
taccagcagaccctgaggtctgcagggaagatctacatgatcttcttcatgctggtcatc
ttcctgggctccttctacttggtgaacttgatcctggctgtggtcgccatggcctacgag
gagcaaaaccaagccaccatcgcagagacagaggagaaggaaaagcgattccaggaagcc
atggagttgctcaagaaagagcaggaggccctcgccatcaggggtgtggacaccgtgtcc
cgcagctccttggagatgtccccattggccccagtaaccacccacgagagaaggagcaag
agaagaaaacgaatgtcttcagggatggaagagtgtggggacgacaagttccccaagtcc
gactcagaggatggtccccgagcagtgaatcgtttcagcatcacccatggcctcagcagg
acctccatgaagccgcgctccagccacgggagcattttcaccttccgccgacgggacctg
ggctccgagacagattttgcggacgatgaaaacagcaccgccggggacagtgagagccac
cgcacatcactgctggtgccttggcccctgcggcggcctagtaccctgggacagcccagt
cccggaacctcaactcccggccacgtgctcaacggcaaaaggaacagcactgtggactgt
aacggggtggtctccttgctgggggcaggagaccccgaggccacctccccagggagtcac
ctcctccaccctatgaagctggagcgccccccagacacgaccacaccatcggaggagccg
ggcaggccccagacgctgacgccccaggctccgtgtgtagacggcttcgaggagccagga
gagcggcagcgagccctcagtgcagtgagcgtcctcaccagtgccctggaagagctggag
gagtctcagcgcaggtgtccaccgtgctggatccgttttgcccagcactacctgatctgg
gagtgctgcccgctgtggatgtccattaagcagaaagtgaagttcatggtcatggaccca
tttgctgacctcaccatcaccatgtgcatcgtgcttaacacgctcttcatggcactggag
cactacaacatgacgaccgaatttgaggagatgctgcaggttggaaacctggtcttcaca
ggaatattcacagcagagatgaccttcaagatcattgccttggacccctactactacttc
cagcagggctggaacatcttcgacagcatcatcgtcatcctcagcctcatggagctgggc
ctgtcccgcatgggcaatctgtcggtgcttcgctccttctgcctgcttcgggtcttcaag
ctggccaagtcctggcccaccctgaacacactcatcaagatcattgggaactcagtgggc
gcgctaggcaacctgacgttggtgctggccatcattgtgttcatcttcgctgtggtgggc
atgcagctctttggcaagaactactcagagcagaggcaccgtatcagtgactcgggcctc
ctgccccgctggcacatgatggacttcttccatgccttcctcatcatcttccgcatcctc
tgtggagagtggatcgagaccatgtgggactgcatggaggtgtctgggcagtcactatgc
ctgctggtcttcctgcttgttatggtcattggtaacctcgtggtcctgaacctcttcctg
gctttactgctcagctccttcagcgcagacaacctcacagctcccgacgaggatggggag
atgaacaacctccagctggctctggcccgcatccagcgaggcctgcgcttcatcaagcgg
accacctgggacttctgctgcgtgctcctgcagcggccgcctcagaagcccgcggccctc
gcctcccagggccagctgccgggctgtatcgccacctccagccccccaccccaaccagag
agcgagaaggcgcccccagcccgcaaggagacgcggtttgaggaaggccagcggccaggt
cagggcgcacctggggatgccgagcctgtgtgtgtgcccatcgccgtggccgagtcagac
acggatgaccccgaggaggatgaggagaacagcctaagcacagaggaagagtccagcaag
cagcaggaatcccagctggcgtccggcagcccagaggccctcccagagccgagggtctgg
agccaggtgtcggagaccacctcctctggggccgaggccagtgaggttcaggcagacttg
cggcagcagcggcgagcagaggcccccgccccagggtgcagtgagcttcccgaagacagt
tactctgaggggagcacggcagatatgaccaacactgctgacctcctggagcagatccct
gacctcggagaggatgtcaaagatccagaggactgcttcactgaaggctgtgtccgccgc
tgtccctgctgcaccgtggacaccacacaggcccacgggaaggtctggtggaggctgcgc
aagacctgctaccgcatcgtggagcacagctggttcgagacgttcatcatcttcatgatc
ctgctcagcagtggcgcactggcctttgaggacatctacctggaggagcggaagaccatc
aaggtcctgctggagtacgccgacaagatgttcacctacgtcttcgtgctggagatgctc
ctcaagtgggtggcctacggcttcaagaagtacttcaccaacgcctggtgctggcttgat
ttcctcatcgtggacgtcttgctgatcagcctggtggccaacgccctgggctttgctgag
atgggccccatcaagtcactgcggaccttgcgtgcgctcagacccctgcgagccctgtca
cgatttgagggcatgagggttgtggttaacgccctggtgggcgccatcccatccatcatg
aacgtcctcctcgtctgcctcatcttctggctcatcttcagcatcatgggcgtgaacctc
ttcgcggggaagtttgggagatgcatcaaccagaccgagggagacctgcccttgaactat
accatcgtgaacaacaagagcgactgtgagtctttcaatgtgactggcgaattgtactgg
accaaggtgaaggtcaactttgacaacgtgggggccgggtacctggcccttctgcaggtg
gcaacatttaaaggctggatggacatcatgtatgcagctgtagactccagggggtacgag
gagcagccccagtgggaatacaacctctacatgtatatctattttgtcatcttcatcatc
tttgggtctttcttcaccctgaacctgttcatcggtgtcatcattgacaacttcaaccag
cagaagaaaaagttagggggccaggacatcttcatgacagaggagcagaagaagtactac
aacgccatgaagaagctgggctccaagaagccccagaagcccatcccacggcccctgaac
aagtaccagggcttcatattcgacattgtgaccaagcaggccttcgacgtcaccatcatg
tttctcatctgcttaaacatggtgaccatgatggtggagacagacgaccagagccccgag
aaggtcaacatcttggccaagatcaacctgctgttcgtgggcatcttcacagccgagtgt
atcttcaagatggttgccctgcgccactattacttcaccaacagctggaacatcttcgac
ttcgtggttgtcatcctctccatcgtaggcactgtgctctcagacatcatccagaagtac
ttcttctccccgacgctcttccgcgtcatccgcctggcccgcatcagccgcatcctcagg
ctgatccgcggggccaagggcatccgcacgcttctcttcgccctcatgatgtccctgccc
gcgctcttcaacatcgggctgctgctcttcctcgtcatgttcatctactccatcttcggc
atggccaacttcgcctacgtcaagtgggaggctggcatcgacgacatgttcaacttccag
accttcgccaacagcatgctgtgcctcttccagatcaccacgtcggcgggctgggatggg
ctcctcagccccatcctcaacacggggcccccctactgcgaccccaacctgcccaacagc
aacggctcccggggcaactgcgggagccccgcggtgggcatcctcttcttcaccacctac
atcatcatctccttcctcattgtggtcaacatgtacatcgccatcatcctggagaacttc
agcgtggccacggaggagagcacggagcccctgagtgaggatgacttcgacatgttctac
gagatctgggagaagttcgacccggaggccacccagttcatcgagtatttggccctgtct
gacttcgccgatgccctgtcagagccactccggatccccaagcccaaccagataagcctc
atcaatatggacctgcccatggtgagtggagaccgcatccactgcatggacatcctcttt
gccttcaccaagagggtcctgggcgaatctggggagatggacgccctgaagatccagatg
gaggagaagttcatggcggccaacccgtccaagatctcctacgagcccatcaccaccacg
ctgcggcggaagcacgaggaggtgtcggccacgatcatccagcgggccttccgccggcac
ctgctgcagcgctccgtcaagcacgcctccttcctctaccgccagcaggcgggcagcagc
ggcctctcggaggaggacgcccccgagcaggagggcctcatcgcctacatgatgaacgag
aacttctcccgccgccccggcccgccctccagctcctccgtctcctccacgtccttcccg
ccctcctacgacagcgtcaccagggccaccagcgacaacccccaggtgcgggcgtctgac
tacagcccaagcgaggatctcgccgacttccccccaacccccgacagggaccgtgagtca
atcgtgtga
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integrated database retrieval system
