Bos taurus (cow): 282087
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Entry
282087 CDS
T01008
Symbol
SYNJ1
Name
(RefSeq) synaptojanin-1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
bta
Bos taurus (cow)
Pathway
bta00562
Inositol phosphate metabolism
bta01100
Metabolic pathways
bta04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
282087 (SYNJ1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
282087 (SYNJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bta04131
]
282087 (SYNJ1)
Enzymes [BR:
bta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
282087 (SYNJ1)
Membrane trafficking [BR:
bta04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
282087 (SYNJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
RRM_1
Motif
Other DBs
NCBI-GeneID:
282087
NCBI-ProteinID:
NP_776893
BGD-bta:
BT12152
Ensembl:
ENSBTAG00000003063
VGNC:
35527
UniProt:
F1MC12
LinkDB
All DBs
Position
1:2827791..2918738
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AA seq
1300 aa
AA seq
DB search
MAFSKGFRIYHKLDPPPFSLIVETRHKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDAY
GLLGVLRLNLGDIMLHYLVLVTGCMSVGKIQESEVFRVTSTEFISLRVDSSDEDRISEVR
KVLNSGNFYFAWSASGVSLDLSLNAHRSLQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLD
DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVN
LLGSKEGEHMLSKAFQSHLKASEHAADIQMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLD
YGIFHFDGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLTKQLEALGLAEKPQLVTR
FQEVFRSMWSVNGDSISKIYAGTGALEGKAKLKDGARSVSRTIQNNFFDSSKQEAIDVLL
LGNTLNSDLADKARALLTTGSLRVSEQTLQSASSKVLKSMCENFYKYSKPKKIRVCVGTW
NVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPMDIFAIGFEEMVELNAGNI
VNASTTNQKLWAAELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKT
GMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNDDFVEIARKLSFPMGRLLF
SHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGKVTF
APTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKILYT
WTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQNIYKEVIAVQGPPDGTVLVSI
KSSLPENNFFNDALIDELLQQFTNFGEVILIRFVEDKMWVTFLEGSSALNVLNLNGKELL
GRTITITLKSPDWIKTLEEEMSLEKINVPLPSSTSSTLLGEDAEVTADFDMEGDVDDYSA
EVEEILPQHLQPSSSSGLGTSPGSSPRTSPCQSPTISEGPVPSLPVRPSRAPSRTPGPPA
SQSSPVDTLPATQLQQKDSSQTLEPKRPPPPRPVAPPARPAPPQRPPPPSGARSPAPARK
EFGAPKSPGTTRRDNLGRSQLPPQAGLPGPGLAGHSAARPIIPPRAGVISAPQSHARVSA
GRLTPESQSKTSEVLKGPALLPEPLKPQAALPVPPSLAPPSLAPPVQKMQEPLIPVAAPL
AQAALQPSLETPPQPPPRSRSSHSLPSEPPAQPQQEQPSG
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagcaaaggatttcggatctatcacaaattggatcccccacctttcagcctc
atagtggaaaccaggcataaggaagaatgtctcatgttcgagtctggggctgtagcggtg
ctctcatcagcagaaaaagaggcaatcaagggtacatactccaaagttctagatgcctat
ggacttttaggtgttttacgattaaatcttggtgatattatgttacattatctggtccta
gtcactggatgtatgtctgttggaaaaattcaagaatctgaagttttccgagttacttcc
actgaatttatatcactgcgagttgattcttcggatgaggatcgcatttcggaagtgcga
aaagttttaaattcaggaaacttttattttgcatggtctgcatccggagtcagtttggat
ctgagtcttaatgcccaccgtagcttgcaagaacacacaactgacaatagatttttctgg
aatcagtctttgcacttgcatctcaagcactacggtgtgaattgtgacgactggttatta
cgcctcatgtgtgggggagtagaaatcagaacaatttatgctgctcataaacaggcaaag
gcttgcctcatttccagactaagctgtgaacgagctgggaccaggtttaacgtccgggga
acaaatgatgatggtcacgttgccaattttgtagaaacagaacaggttgtgtacttagat
gactctgtttcttccttcatacaaatccggggatctgtcccattgttctgggagcagcca
ggattgcaggtgggatctcatcgtgtccgtatgtcaaggggatttgaagccaatgcacct
gcttttgacaggcattttaggacacttaagaatttgtatggtaaacaaataatagtaaat
ctgcttggatctaaggaaggtgaacatatgctaagtaaggctttccagagtcatctgaaa
gcttctgaacatgctgctgatatccagatggtgaattttgactatcatcaaatggttaaa
ggaggaaaggcagaaaaattacatagtgttcttaaacctcaagtccagaagtttctggat
tatggaatttttcattttgatggaagtgaagttcaaaggtgccagagtggtacagttcga
acaaactgcttggattgtcttgacagaacaaatagtgtgcaggcattccttggtttagag
atgctgactaaacagttggaagctcttggtttagctgaaaagcctcagttggtgactcgc
tttcaagaagtttttcgatcaatgtggtctgtgaatggtgattcaatcagtaagatttat
gcaggaactggagcccttgaaggaaaggctaagttaaaagatggtgctcgttcagttagt
agaacaattcagaataacttctttgacagctccaagcaagaagcaattgatgttttgctc
ctgggaaatactctaaatagtgatttagctgacaaagctcgagcccttttaactactgga
agtttgcgtgtttctgaacagacgttacagtcagcatcttctaaagtactaaagagtatg
tgtgagaatttctacaagtattcaaagcccaagaaaattcgagtatgtgtgggcacatgg
aacgtgaatggcgggaagcagtttcgcagcatagcttttaagaatcagacccttacggac
tggcttcttgatgcccccaagttagctggcatccaggagtttcaagataaaagaagtaaa
ccaatggatatatttgcaattggttttgaggaaatggtagagctgaatgctggaaacatt
gtgaatgcaagcacaacaaatcagaagctctgggctgcggaacttcagaagaccatctcc
agagacaacaagtatgtgctgctggcctctgagcagttggtgggcgtctgtctgtttgtt
tttatcagaccacagcacgctcccttcatcagggatgttgcagttgatactgtgaaaact
ggaatgggaggcgcaactggaaataagggagcagttgcaatacgaatgctgttccacacc
acaagcctctgctttgtctgcagccacttcgctgcgggacaatcccaagtcaaagaacga
aatgatgattttgtagaaatagcgcggaagttgagttttccaatgggaaggctgctcttc
tcccatgactatgtgttttggtgtggcgatttcaactaccgaatcgatctccctaatgag
gaagtgaaagagcttatcagacagcaaaactgggattctcttatcgcaggagatcagctt
atcaatcagaaaaatgctggacagatttttagaggatttttagaaggaaaagtgaccttt
gctccaacgtataaatacgacttgttttctgatgactacgacactagtgaaaagtgccgc
acccctgcatggacagaccgtgtcctctggagaagacggaagtggccttttgatagatca
gctgaagatttagatctcctaaatgctagttttcaagatgaaagcaaaatcctctacaca
tggactcctggcactttgctgcactacggaagggctgagctgaagacttctgaccatagg
cctgttgttgccctgatcgatattgatatatttgaagttgaagctgaagagaggcaaaac
atttataaagaagtaattgcagttcagggtccaccagatggtacggtgttggtctcaatc
aaaagctctttaccagaaaataattttttcaacgatgctttgattgatgagcttttacag
cagtttacaaatttcggtgaagttatactcataagatttgtggaagataaaatgtgggtt
acgtttttagagggaagctctgccttgaatgttctgaacctgaatgggaaagagttactg
ggtaggacaataacaattactttaaaaagtccagactggatcaaaactttggaagaagaa
atgagcttagagaaaatcaacgtccccttgccatcatcaaccagctccaccctcctaggt
gaagacgcggaggtcacggccgacttcgatatggaaggtgatgtggatgactatagtgct
gaggtagaggagatccttcctcagcatctccagccgtcttccagttctggccttggcacg
tcccccggttcttcaccccggaccagtccctgccagtcacctaccatatcggaggggcct
gtgccttccctcccagtgagaccaagtcgagctccgtccagaacgcccgggccccctgct
tcacaaagttctcctgttgacactctgccggcaacacagctgcagcagaaagattcttcc
cagaccctggaacccaagcggcctccccctccccgcccggttgctcctcctgcacgtcca
gctcctccacaacgaccacctccgccttcaggggctaggagtcctgcacctgctagaaaa
gagtttggagcacccaaaagcccaggaacgacccggagagataatctaggacgcagccag
cttccacctcaagccggactgccaggcccgggacttgctggacacagtgcagccagaccg
attattccgccccgtgctggagtcatcagcgccccccagagccacgcacgggtgtctgct
gggagactgactcctgaaagccaaagcaaaacctcagaagtactgaaagggccagctctt
cttcccgagcccctgaagcctcaggccgcccttcctgtgccgccttctcttgcgccacct
tctcttgcgccacctgttcagaagatgcaggagcctctcatcccggtggccgcacctctg
gcccaggctgccctgcagcccagcctggaaacgcccccgcagccaccccctcggagcagg
tcgtcccacagcttgccttctgagcctccggcgcagccgcagcaggagcaaccatcaggg
taa
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