Bos taurus (cow): 282691
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Entry
282691 CDS
T01008
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
bta
Bos taurus (cow)
Pathway
bta03410
Base excision repair
bta04140
Autophagy - animal
bta04217
Necroptosis
bta04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
282691 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
282691 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
282691 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
282691 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
282691 (HMGB1)
03400 DNA repair and recombination proteins [BR:
bta03400
]
282691 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bta04147
]
282691 (HMGB1)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
282691 (HMGB1)
DNA repair and recombination proteins [BR:
bta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
282691 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
282691 (HMGB1)
Exosome [BR:
bta04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
282691 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
282691
NCBI-ProteinID:
NP_788785
BGD-bta:
BT10780
Ensembl:
ENSBTAG00000018103
VGNC:
53816
UniProt:
P10103
LinkDB
All DBs
Position
12:30209575..30334067
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatattcct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacctaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggcgaacatcctggcctg
tctattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcggatgat
aagcagccttatgagaagaaggctgctaagctgaaggaaaagtatgaaaaggatattgcc
gcataccgagctaaagggaaacctgatgcagcaaaaaagggagttgtcaaggctgaaaag
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggaa
gaagatgaagaggatgaggaggaggaagaagatgatgatgatgaataa
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integrated database retrieval system