KEGG   Bos taurus (cow): 282691
Entry
282691            CDS       T01008                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
bta  Bos taurus (cow)
Pathway
bta03410  Base excision repair
bta04140  Autophagy - animal
bta04217  Necroptosis
bta04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    282691 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    282691 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    282691 (HMGB1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    282691 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bta03036]
    282691 (HMGB1)
   03400 DNA repair and recombination proteins [BR:bta03400]
    282691 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bta04147]
    282691 (HMGB1)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    282691 (HMGB1)
DNA repair and recombination proteins [BR:bta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     282691 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     282691 (HMGB1)
Exosome [BR:bta04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   282691 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 NOA36 HMG_box_5 Nop14
Other DBs
NCBI-GeneID: 282691
NCBI-ProteinID: NP_788785
BGD-bta: BT10780
Ensembl: ENSBTAG00000018103
VGNC: 53816
UniProt: P10103
LinkDB
Position
12:30209575..30334067
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatattcct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacctaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggcgaacatcctggcctg
tctattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcggatgat
aagcagccttatgagaagaaggctgctaagctgaaggaaaagtatgaaaaggatattgcc
gcataccgagctaaagggaaacctgatgcagcaaaaaagggagttgtcaaggctgaaaag
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggaa
gaagatgaagaggatgaggaggaggaagaagatgatgatgatgaataa

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