Bos taurus (cow): 286772
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Entry
286772 CDS
T01008
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1 precursor
KO
K12385
Niemann-Pick C1 protein
Organism
bta
Bos taurus (cow)
Pathway
bta03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
bta04142
Lysosome
bta04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
286772 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
286772 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
286772 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bta02000
]
286772 (NPC1)
Transporters [BR:
bta02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
286772 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
MMPL
ACR_tran
TMEM51
Motif
Other DBs
NCBI-GeneID:
286772
NCBI-ProteinID:
NP_777183
BGD-bta:
BT11606
Ensembl:
ENSBTAG00000015195
VGNC:
32194
UniProt:
Q9GLC9
LinkDB
All DBs
Position
24:33058694..33105394
Genome browser
AA seq
1277 aa
AA seq
DB search
MSVLGPAFGLLLLLFCPAQVFSQSCIWYGECGIASGDKRYNCRYSGPPEPLPQDGYDLVQ
ELCPGFFFGNVSLCCDVQQLHTLKDNLQLPLQFLSRCPSCFYNLVNLFCELTCSPRQSQF
LNVTATEDYVDPATNQTKTNVKELQYYVGESFANAMYNSCRDVEAPSSNEKALGLLCGRE
ASACNATNWIEYMFNKDNGQAPFTITPVFSDLPTHGMEPMNNATKGCDESVDEVTGPCSC
QDCSAVCGPKPQPPPPPVPWKILGLDAMYVIMWSTYMAFLLVFFGAFFAVWCYRKRYFVS
EFTPIDGNIPFSINASDKGGPTCCDPLGAAFEAHLRRLFEWWGSFCVRHPGCVVFFSVAF
IAACSSGLVFIQVTTDPVDLWSAPGSQARLEKEYFDTHFGPFFRTEQLIIRAPHTPPHIY
EPYPSGADVPFGPPLAVNILHQVLDLQTAIESITASYNNETVTLRDICVAPLSPYNQNCT
ILSVLNYFQNSHSVLDHQVGDDFFVYADYHTHFLYWVRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINFVQNYENPNLT
ISFKAERSIEDELNRESNSDVFTVLISYGVMFLYISIALGHIKSCRRLLVDSKILLGIAG
VLIVLSPVACSLGFFSYWGSPLTLIVIEVIPFLVLAVGVDNIFILVQTYQIDERLQGETL
DQQVGRVLGEVAPSMFLSSFAETVAFFLGGLSVMPAVHTFSLFAGMAVLIDFLLQITCFV
SLLGLDIKRQEKNQLDVLCCVGGAADDAGIQASESCLFRFFRNSYAPLLLKDWMRPLVVA
VFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVTDYFQSLNQYLHAGPPVYFVLEEGHDYT
STKGQNMVCGGLGCNNDSLVQQVFTAAQLDSYTRIGFAPSSWIDDYFDWVKPQSSCCRIY
NSTEQFCNASVVNPTCVRCRPLTPEGKQRPQGADFMRFLPMFLSDNPNPKCGKGGHAAYS
AAVNILDNGTRVGATYFMTYHTVLQTSADFIDAMEKARLIASNITRTMNQQGGDHRVFPY
SVFYVFYEQYLTMIDDTIFNLSVSLGAIFLVAVVLLGCELWSAVIMCATIAMILVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVERAEEALSHMGSSVFSG
ITLTKFGGIIVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSINKAKSL
TTQQRYRGTEREQLLNF
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgctcggcccagccttcggcctcctcctgctgctgttctgcccggcgcaggta
ttttcacagtcctgcatttggtatggagagtgtggaattgcatctggagataagagatac
aactgcagatattctgggccaccagagccattgccacaggatggctatgacctagtgcag
gaactctgtccagggttcttctttggcaatgtcagtctttgctgtgatgtccagcagctt
cacacactgaaggacaacctgcagctgcctctgcagtttctgtccagatgtccatcctgt
ttttataacctagtgaacctgttttgtgagctgacatgtagccctcgacaaagtcagttt
ctgaacgttacagcaactgaagattatgttgatcctgctacaaaccagacgaaaacaaat
gtaaaagaattacagtactatgttggagagagttttgccaatgccatgtacaattcctgc
cgggatgtggaggccccctcgagcaacgagaaggccctggggctgctgtgcgggcgtgag
gccagcgcctgcaatgctactaactggatcgagtacatgttcaacaaggacaatggccag
gcgcccttcaccatcacccccgtcttttcagatcttccgacgcatgggatggagcccatg
aacaatgccaccaagggctgtgacgagtcggtggacgaggtcacggggccgtgcagctgc
caggactgctcggccgtctgcggccccaagccccagcccccaccccctcccgttccctgg
aaaatcctgggtctggacgccatgtatgtcatcatgtggagcacctacatggctttcctg
ctcgtgttctttggagcgttctttgctgtgtggtgctacagaaaacggtattttgtctct
gagtttacccccattgatggcaatatacctttctctataaacgccagtgacaaagggggg
ccaacctgctgtgaccctttgggtgccgccttcgaggctcatctgcggcggctcttcgaa
tggtggggctccttctgcgtgaggcaccccggctgtgtcgtgttcttctccgtggccttc
atcgccgcctgttcctcaggcctggtgttcatccaggtcacaaccgacccggtggacctc
tggtcggcccccggcagccaggcgcgcctggagaaggagtactttgacacgcacttcggg
cccttcttccgcaccgagcagctcatcatcagggccccccacaccccgccgcacatatac
gagccctacccctcgggagccgacgtgccctttgggcctccccttgctgtaaacattctg
caccaggtccttgacttacaaaccgccatcgagagcatcactgcttcttacaacaacgag
actgtgaccctgcgggacatttgcgtggcgcccctctcgccatacaaccagaactgcacc
atcctgagtgtgctgaactacttccagaacagccactctgtgctggaccatcaagtcggg
gatgacttcttcgtgtatgcagattaccacacgcacttcctctactgggtccgggctcct
gcttccctgaatgacaccagtttgctccacgatccttgcctggggacgtttggtggccca
gtgttcccatggcttgtgcttggaggctacgatgatcaaaactacaataacgccacagcc
cttgtgatcacctttcctgtcaataattactataacgatacagagaagctccagagggcc
caggcctgggaaaaagagttcattaattttgtgcaaaactacgagaatccaaatctgacc
atttcttttaaggctgaacgaagcattgaagatgaactaaaccgtgaaagtaacagtgat
gtgttcactgttctgatcagctatggcgtcatgtttttatatatttccatagccttgggg
catatcaaaagctgtcgcaggcttctggtggattcgaaaatactcctgggcattgccggt
gtcctgattgtgttgagcccagtggcctgctccttgggcttcttcagctactggggctcc
cccctcaccctcattgtgatagaagtcatcccattcctcgtgctggctgtgggggtggac
aacatcttcatcctggtccagacctaccagatagatgaacgtcttcaaggggaaaccctc
gaccaacaggtgggccgggtcctgggagaagtggctcccagcatgttcctctcatccttc
gcagagacggtagcgtttttcttaggaggcctgtctgtgatgccggccgtgcacacgttc
tctctcttcgcgggcatggcagtcctcatcgacttcctcctgcagatcacctgcttcgtg
agcctcctgggtttggacattaagcggcaagagaagaaccagctggacgttctctgctgt
gtcgggggggcggcagacgacgcgggcatccaggcctccgagagctgcttgttccgcttc
ttcagaaactcctacgcgccgcttctgctcaaggactggatgcggcccctcgtggtggca
gtatttgtgggtgtgctgtcgttcagtatcgcagtcctgaacaaagtagagatcggattg
gatcagtctctttcaatgccggatgactcctacgtgacggattacttccagtccctgaat
cagtacctgcacgcaggcccacctgtgtacttcgtgctggaggagggccacgactacacg
tccacgaaggggcagaacatggtgtgcgggggcctcggctgcaacaacgactcgctggtg
cagcaggtcttcacggccgcccagctggacagctacacccggataggctttgccccgtcg
tcctggattgacgattactttgactgggtcaagcctcaatcttcttgctgtcgcatctac
aacagcacggagcagttctgcaatgcatcggtggtcaaccctacctgtgtccgctgccgg
ccgctgactccagagggcaagcagagacctcagggcgcagacttcatgaggttcctgccc
atgttcctctccgacaacccgaaccccaagtgtggcaaagggggacacgctgcctacagc
gcagccgtcaacatcctggacaacggcacgagggtgggagccacgtacttcatgacctac
cacacggtgctgcagacctcggctgacttcatcgatgccatggagaaggcccgcctcatc
gccagcaacatcaccaggaccatgaaccagcaggggggtgatcaccgggtgttcccatac
agcgtgttctatgtcttctatgagcagtacctgaccatgattgacgacaccatcttcaac
ctcagcgtgtccctgggcgccatcttcctggtggccgtggtcctcttgggctgtgagctg
tggtctgcggtcatcatgtgcgccaccatcgccatgatcttggtcaacatgtttggtgtc
atgtggctgtggggcatcagcctgaacgcggtttctctggtcaacctggtcatgagctgt
ggcatctccgtggagttctgtagccacatcacgagggccttcacggtgagcacgaagggc
agccgcgtagagcgggcggaggaggcgctctcccacatgggcagctctgtattcagtgga
atcacactaacgaaatttggaggcattatcgtgttggcttttgccaaatctcaaattttc
cagatattttacttcaggatgtatttagctatggtcttactgggagccactcatggacta
atattcctccctgtcctactcagttacataggcccgtcaataaataaagccaaaagtttg
accacgcagcagcgatacagaggtacagaacgagaacagctcctcaatttctag
DBGET
integrated database retrieval system