Bos taurus (cow): 286821
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Entry
286821 CDS
T01008
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
bta
Bos taurus (cow)
Pathway
bta04340
Hedgehog signaling pathway
bta04360
Axon guidance
bta05200
Pathways in cancer
bta05205
Proteoglycans in cancer
bta05217
Basal cell carcinoma
bta05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
286821 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
286821 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
286821 (SHH)
05205 Proteoglycans in cancer
286821 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
286821 (SHH)
05217 Basal cell carcinoma
286821 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bta01002
]
286821 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bta00536
]
286821 (SHH)
Peptidases and inhibitors [BR:
bta01002
]
Cysteine peptidases
Family C46: hedgehog family
286821 (SHH)
Glycosaminoglycan binding proteins [BR:
bta00536
]
Heparan sulfate / Heparin
Morphogens
286821 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
286821
NCBI-ProteinID:
XP_024847069
BGD-bta:
BT24488
Ensembl:
ENSBTAG00000024552
VGNC:
34597
UniProt:
F1MM97
LinkDB
All DBs
Position
4:complement(117483495..117495745)
Genome browser
AA seq
464 aa
AA seq
DB search
MDEMLLLARCLLVLLVSSLLMCSGLACGPGRGFGKRRNPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDEGRLLYSD
FLTFLDRDRGAKKVFYAIETREPRERLLLTAAHLLFVAPHNGSAAGAPEGATAAAAAAAA
GGGAPGRRALFASRVRPGQHVYVVAERGGARRLLPAAVHSVTLREETAGAYAPLTAHGTI
LINRVLASCYAVIEEHSWAHGAFAPYRLAHALLAALAPGRTDRGGAGDGGGGGRVPSPAP
GAPGSADAPGAAGIHWYSELLYQIGTWLLDSEALHPLGMAVKSS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatgctgctgctggcgagatgtctgctggtgctgcttgtctcctcgctgttg
atgtgctcggggctggcgtgcggacccggcaggggatttggcaagaggcggaaccccaaa
aagctgacccctttagcctacaagcagtttatccccaacgtggcggagaagaccctaggg
gccagtggaagatatgaggggaagatcaccagaaactcagagcgatttaaggaactcacc
cccaattacaaccccgacatcatatttaaggatgaagaaaacactggagcggaccggctg
atgactcagaggtgcaaggacaagctgaacgccttagccatctccgtgatgaaccagtgg
ccgggcgtgaagctgcgggtgaccgagggctgggacgaggatggccaccactcggaagag
tcgctgcactacgagggccgcgcagtggacatcaccacctcggaccgcgaccgcagcaag
tacggcatgctggcgcgcctggccgtggaggccggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtgaaagcagagaactcggtggcggccaagtcgggcggc
tgcttcccgggctcggccacggtgcacttggagcagggcggaaccaagctggtgaaggac
ctgcggcccggggaccgcgtgctggcggccgacgacgagggccggctgctctacagcgac
ttcctcaccttcctggaccgcgaccgcggcgccaagaaggtcttctacgccatcgagacg
cgggagcctcgcgagcgcctgctgctcaccgccgcgcacctgctcttcgtggcgccgcac
aacggctcggccgcgggggcgcccgagggggcgacggcggcggccgcggcggcggcggcg
ggcgggggcgcgcccgggcgccgggcgctcttcgccagccgcgtgcggccgggccagcac
gtgtacgtggtggccgagcgcggcggggcccggcggctgctgcccgccgcggtgcacagc
gtgacgctgcgcgaggagacggcgggcgcctacgcgccgctgacggcgcacgggaccatc
ctcatcaaccgggtgctggcctcgtgctacgcggtcatcgaggagcacagctgggcgcac
ggggccttcgcgccctaccgcctggcgcacgcgctcctggccgcgctggcgcccgggcgc
acggaccgcggcggagccggcgacggcgggggcggcggccgcgtcccctcgcccgcgccg
ggggcgccggggtcggccgacgcgccgggcgccgcgggcatccactggtactcggagctg
ctctaccaaataggcacctggctgttggacagcgaggctttgcatccgctgggcatggcg
gtcaagtccagctga
DBGET
integrated database retrieval system